Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00150 ATGTCATTTCACAGTGGAAATGGTAGTGGTTATTCTGCATTGGATTGGCCAGATGAATTTCTCATGCAAGATAGCTATTTTGATCCTATCCCTCTTATGGAGTGTAACTACTCTGCTGATCCTTTGTATGAAACTCTAGCCATTGAGCCAATACCAAGATTTCAAGACTATGATTTTTATGATGTGAAGAAGGGGTTTTCTCTATGGAACGAAATTGATGCTGGGTTTGATTCAGAAAAGAATGATTTTTTATATTGCAACAATGGTGAGAGTAGTAAGGAAATGATTATGGAAGATGGGAATGTTAAGAGAGGGAGAGAAGAAAGGAGTGGCAGTACTAGAATGTTGTCAAGGAAGACCATATCTCAGTATTTCTATATGCCAATAACACAAGCAGCCAGAGAGCTTAATGTGGGTTTGACACTTTTGAAGAAAAGGTGCAGAGAGTTAGGGATTCGAAGGTGGCCCCACAGGAAGCTCATGAGCCTGCAAACACTCATAAATAATGTACAGGAGCTGGGGAAAGAGGAGGGGCCTGAGAGTGAAGAAAAGTTGAGGAGTGCAATTGAGATATTGGAGAAGGAGAAGAAGCTTATGGAGGAAATGCCAGATATGCAACTTGAAGATCACACAAAAAGGCTTAGACAAGCGTGTTTTAAGGCTAACTATAAGAAGAGGAAGCTCATGGGGCAGATGGAACCACAGACACAGTCTTCTTCTTCTTTCAGTGACTCTGTTAACAGCTATGACTATTTTGAAACAAAGGGTGAATATAGTTTTTAG 783 0.401 MSFHSGNGSGYSALDWPDEFLMQDSYFDPIPLMECNYSADPLYETLAIEPIPRFQDYDFYDVKKGFSLWNEIDAGFDSEKNDFLYCNNGESSKEMIMEDGNVKRGREERSGSTRMLSRKTISQYFYMPITQAARELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKEEGPESEEKLRSAIEILEKEKKLMEEMPDMQLEDHTKRLRQACFKANYKKRKLMGQMEPQTQSSSSFSDSVNSYDYFETKGEYSF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00150 260 ProSiteProfiles RWP-RK domain profile. 97 184 IPR003035 -
Sebi110g00150 260 Pfam RWP-RK domain 116 163 IPR003035 -
Sebi110g00150 260 Coils Coil 182 202 - -
Sebi110g00150 260 PANTHER PROTEIN RKD4 103 244 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00150 Sebi-Chr110 1933903 1934846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00150 103 236 AtRKD Transcription Factor Family AT1G18790 67.153 6.39e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Sebi110g00150 RWP-RK 4.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00150 - - gmx:100788666 301.982