Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00140 ATGGCAATTCTTCCAGCTCTCCTCTTAGTTATCCACGTAAACGGTCACCGCCTACACCGCTGTTCCAAGCCCCACCTCCCCCTGAGAGGTTCTCATCGCTGCACTGTGCTTCGAGTAGTGCACCGTCCAATGATTCAAACCAGCGGCGGGAGCCCTTGCACGGTGGTGGGTCCCATGCAAAATCAAGGGATTCTTCTCCCGGCTCCTCTCAAGGGGATAATTCAGGAAAATATATTGGCTATTCTCTCGCTGAGGAGGAAGAAAGCAAAAGGGGATGTCTATGGTGCTGATGGGAATTATTATGTACAACAGCCTTCCCTTGGAAGGAACTATGGAAGTGGGAAGATTGGAGGAAGCATGAAGCATCTAGGAGGTCCTTTAGAGTCGGCACAACCCAAGAGTGCTCAGGTAGCATTTAGTTATGACATGGTTATGGAAATAACTAATTCATTTTGCAATGAAAACGTTATAGGGGAAGGAGGATTCAGGTGTGTTTACAAAGGTTGGCTGACGGGTGGAAAAGCTGTTGCGGTGAAGTAG 540 0.4852 MAILPALLLVIHVNGHRLHRCSKPHLPLRGSHRCTVLRVVHRPMIQTSGGSPCTVVGPMQNQGILLPAPLKGIIQENILAILSLRRKKAKGDVYGADGNYYVQQPSLGRNYGSGKIGGSMKHLGGPLESAQPKSAQVAFSYDMVMEITNSFCNENVIGEGGFRCVYKGWLTGGKAVAVK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00140 179 Gene3D Phosphorylase Kinase; domain 1 121 179 - -
Sebi110g00140 179 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 93 179 IPR047117 -
Sebi110g00140 179 SUPERFAMILY Protein kinase-like (PK-like) 130 179 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00140 Sebi-Chr110 1769132 1770194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00140 61 179 Trihelix Transcription Factor Family AT1G23540 38.583 1.28e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00140 - - gmx:100797563 115.161