Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00138 ATGGCGATTTCGCTCTGTCTCCAAATTCATATTATGCGCCCTTCTGGTGCTCTCACTGGCTGTTTTGCCATTGCCGGGGCCCTCACAGGAGCTATAGCTGGTGCTTTAGCAGCTAAAGCTACAAAGAGTGGTTTTCTCCGGGGAGTTTCATTGGGTGCTATTGCTGGGGCTATACTCTCAGTGGAGGTGTTAGAAGCTTCCCGTGCATACTGGTGTATGGAGCAAAACTGGTTCACGGGGGGCATCATCTATGGCAGATTCATAGAGGAACTTGTTCGTGGGAGGCTTGTAGAGGAATCACTTGCACCTGCTATTTTAACTGCTTACAATTTGCAGTTTGAGCAGGTTGGCATTGCTAATACAGGCTATGATGAGTTTCATGATGTTCATGGCTTAGTAGCGTCCAGAGGATTGTCTGGGGAATCATTGAAGAAGCTACCACACCATATGATCATGAAGGCAGAGAATACTTGCTGTGCAATTGTTTGCAGAGAGGAGCAATTGCAGGTGGTGACAGCAAGCCAGGCAACATAA 534 0.4757 MAISLCLQIHIMRPSGALTGCFAIAGALTGAIAGALAAKATKSGFLRGVSLGAIAGAILSVEVLEASRAYWCMEQNWFTGGIIYGRFIEELVRGRLVEESLAPAILTAYNLQFEQVGIANTGYDEFHDVHGLVASRGLSGESLKKLPHHMIMKAENTCCAIVCREEQLQVVTASQAT 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00138 177 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 15 162 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00138 Sebi-Chr110 1758229 1763047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00138 15 174 C3H Transcription Factor Family AT1G74410 46.341 1.56e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00138 - - gmx:100800105 224.942