Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00134 ATGACCCCTTCACCCGTGTTAGTTGTTCGATCTACTGACAACGTTGTCTGTCCTTATGGTTTTGGTGACATAGCAAGAGATCTTAGGCCATCGAGGGTTGCAATGGAGAATGAGCCTGAGACTGAGGAAACTATTAATTTGAATAGTAAAGAGAACAATTGTGTTAGAAATAATCCTAAGAGTGGTGATGTCTTCATTGACAGAAGTAAAGTCAGGATTTTGTTATGCGATAACGATTCCAAGAGTTCCGAAGAGGTTACTACTCTTCTTCTGGGATGCTCTTATCAGGTTACTTCAGTAAAGTCACCAAGGCAGGTAATTGATGCACTGAATGCAGAGGGGCAATATATAGATATCATACTAGCTGAACTTGACCTTCCGATAAAGAAGGGCATGAAAATGTTGAAGTACATAGCACGGGATAAAGAATTGCGCCGAATCCCTGTTATAATGATGTCTGCACAAGATGAGGTATCTATTGTCGTTAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTACGCACTAATGAACTATTAAACTTGTGGACACACATGTGGAGAAGGAGACGCATGCTTGGACTTGTGGAGAACAACATCTTGAATTATGACTTTGATCTGGCAGCATCAGACCCAAGTGATGCCAATACAAACAGTACCACCTTGTTCTCTGATGACACAGATGACAGGTCCAAAAGAAGCACTAATCCAGAGGCAGGAATATCTGTCCAACAAGAACAAGAGGCTAGTATTGCCACAGCTGCTGCTATTGTTGAGGAATTTCCAGATGCTCATGTATCAGAGTATCAGCCTGATGTACCCGGAATTAGTGATCGCCGAACAGGTACTCCGGGGCAGCATCCATCATGCAACAGAATTACTGATGGAAATTTTTCATCTGGTCCAAAGAAGAGCGAACTAAGGATCGGAGAGTCATCAGCCTTTTTTACTTATGTCAAAGCAACAATTCCGAAGAGTAACTTTGAAGAGATTGCTCATGTTGACAATAATGCTACTACACAAGTAAGGGTGGAAGATATGAATCAAGCATGTGCTCAACAGGGGGGTAATGACTTTAAAACACAGGATAATGGAGAAATGTTTGAAAGCCATTCTCAAGATGACTTGCCCAGCAGCAATAGTATCCCTGATTCTTTCTCTCTTGAGAGATCTTGTACTCCACCTGCATCAATGGAAGTTTTACAGCAAAAGAATTACAAGGAAGGACATCCTCAGGGATTGGTGCATCCAAGAAATGGAAGCCATGGTTCTGAGCTTGAACCATCTGGCATGCCTGCCCAGCATGCTTATCCATATTATATTTCAGGAGGTTTTAATCATGTTATGATGCCATCATCAGCCCAACTGTATCAAAAGAATATCCAGGACCTGCATAATCATGCTAATTCATCTATGATTGCACAGTACAATCATCTTCCCCAATGTCCTCCTCATGCAACTGGGATGGCATCCTTCCCATATTATCCAATGAGTATTTGCTTACAACCTGGTCAGGTTTCTACAACTAATTCATGGCCATCATTAGGAGGTTCAAGTTCATGTGAAGTAAAAATAAGTAAAGTTGATAGGAGAGAAGCAGCGTTGATGAAGTTTAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTCAACAGAAAACGACTTGCTGAAAGGCGGCCTCGTGTGAGGGGACAGTTTGTCAGAAAGTTGAATGGCATTGATGTGGATCTTAATGGACAACCTGCTTCCACTGACTATGATGAAGATGATGAAGAGGAGGAAGAAAACCATGGAGCAAGAGATTCCTCTCCCGAGGATGCTTGA 1845 0.419 MTPSPVLVVRSTDNVVCPYGFGDIARDLRPSRVAMENEPETEETINLNSKENNCVRNNPKSGDVFIDRSKVRILLCDNDSKSSEEVTTLLLGCSYQVTSVKSPRQVIDALNAEGQYIDIILAELDLPIKKGMKMLKYIARDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILNYDFDLAASDPSDANTNSTTLFSDDTDDRSKRSTNPEAGISVQQEQEASIATAAAIVEEFPDAHVSEYQPDVPGISDRRTGTPGQHPSCNRITDGNFSSGPKKSELRIGESSAFFTYVKATIPKSNFEEIAHVDNNATTQVRVEDMNQACAQQGGNDFKTQDNGEMFESHSQDDLPSSNSIPDSFSLERSCTPPASMEVLQQKNYKEGHPQGLVHPRNGSHGSELEPSGMPAQHAYPYYISGGFNHVMMPSSAQLYQKNIQDLHNHANSSMIAQYNHLPQCPPHATGMASFPYYPMSICLQPGQVSTTNSWPSLGGSSSCEVKISKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGIDVDLNGQPASTDYDEDDEEEEENHGARDSSPEDA 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00134 614 Gene3D - 71 273 - -
Sebi110g00134 614 Pfam CCT motif 534 576 IPR010402 GO:0005515
Sebi110g00134 614 MobiDBLite consensus disorder prediction 580 614 - -
Sebi110g00134 614 MobiDBLite consensus disorder prediction 285 304 - -
Sebi110g00134 614 SUPERFAMILY CheY-like 67 196 IPR011006 -
Sebi110g00134 614 MobiDBLite consensus disorder prediction 277 306 - -
Sebi110g00134 614 PANTHER TWO-COMPONENT RESPONSE REGULATOR 71 268 IPR045279 GO:0009736
Sebi110g00134 614 SMART REC_2 71 186 IPR001789 GO:0000160
Sebi110g00134 614 Pfam Response regulator receiver domain 73 184 IPR001789 GO:0000160
Sebi110g00134 614 ProSiteProfiles CCT domain profile. 534 576 IPR010402 GO:0005515
Sebi110g00134 614 MobiDBLite consensus disorder prediction 357 395 - -
Sebi110g00134 614 MobiDBLite consensus disorder prediction 217 249 - -
Sebi110g00134 614 MobiDBLite consensus disorder prediction 374 395 - -
Sebi110g00134 614 ProSiteProfiles Response regulatory domain profile. 72 190 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00134 Sebi-Chr110 1714684 1719951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00134 60 613 Response Regulator Gene Family AT5G61380 51.163 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Sebi110g00134 Response_reg 5.1e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00134 K12127 - gmx:100786522 964.526