Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00129 ATGGAAGATGCCAAAACAAGATCTTTATCTGCTCCTGTTGTCTCTGCATCAGTTGTTTCTATGGACATGAAAAATGACTTGAAAAGTCGTAAGGTTGCTACATCAAAATCTTCTGGCTACATAGTAGCAGAAATAGATGCAAAACATCCACCATCACCATTACCATCAATTAAAGAGCTTCAGTCGGCTACTCAAGCACAACAACGGAGCTCAGAGCAAGTGCTACAGCCCCCCCAACCGTCTCCCCCTCCGTCTCCATCTCATGCTAGTAACTCTTCACATATTTTTGAACCCTTATCATTACAGGAGGATGTATCACTTCAAGCCTCTCCATCACCACCAGTAACACCATCTTCTTTAGGTGGAAAGGGGTCCATTGCACCGCCCGCTGTGACCACCGGTCCACCACCCCACCCCTGTTTTTTTACATCATTTACTGGACAAAAAGGAGCTTATTACATTCCCCATCCACCTCCATTTCTGAAGCTTACTGCAGTACCCCTTCAAGGCCACTGCCTCCTCCACCGTCCCCACCACTGCCTCCTCCAAGCAAAGCACCACCACCCTCCGCTCCACCTCTCACCTCAACCTCCACCCCACCTCCTTTTAGTGTGCCCACCACCACCACCACCCCCACCACCCTTTCAGTACCCACCACCTCCACCTCCACCTATCCTTTTAGTAGTGCTCCACCACCACCACTCCACCTCCTTTAGTAGTGCTCCACCACACCACCTCCCACCTCCTTTTAGTAGAGTTCCACCACCACCACCTCCCCTCCTTTTAGTAGTGCTTCCACCGCCACCACCTCCACCTCCTTTTAGTAGAGCTCCACCACCACTCACCACCTTCACACCTCCTTTTAGTAAAGCTCCTCCACCTCCGCCTCCCCTCCTTTTAGTAAAGCGCTCCTCCCACCTCCTCCTTTTAGTAATTCTCCTCTCACCACTCCACCTCCTTTTAGTAATGCTCCTCCTCACCACCTCCACCTCCTTTATGGAGCCCCCACCGCCACCTCCACCTCCTCCAAGTCTAGAGCACCACCACCTTCCTCCTCCTCCATGCGTGAGCACCACACCACCACCTCCTCCATGCATGGAGCTCCACCTCCACCACCACCTCCTGGTGGTCGAGCCACCTCCTCCACCCCTCCTGGTGCTCGAGGGTCCACCTCCTCCACCTCTTCCCGGTGCTCCTAGACCCCTGGTGGTGCACCTCCCCACCTCCGCCCTTAGGTTCCAAAGGTGCAAAGTTGGAGCTGATCCAAGCGTAGAGTGCCGTGGATATGCACGCCCCGCAGGAGCTGTGCAGTGGCACCCCGTGATCCTCCTAAAGCCTCTACATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACACGGGGAACCTCAAATTGCACCAGAGTTTGATGTTTCAATCAAGCTCGAGAAGCTTTTTCTCCGCGAATGTTCCAAAAACCTGCTGATTCAAGTGGCAAATCTGGAGGGCGACGCAAGTCTGTTGGATCTAAAAACTGACAAAGTCCAATTGATTGACCTAAGGAGAGCTAACAATACTGAAATTATGCTCACTAGGTTAAGAATGCCACTTCCTGACATGATGGTGGAAAATCTCATTAAGTTTTGGTCCTACAAAAGAGGAGATGGAACTTTTGAAGGATACACTGGTGACAAAGGAATTTGGGGAAGTGTGAACAGGTGCCAAGGGGTGGAGTCAAAATTAGAGTATTCTCTTTCAAATTCAGTTTGGGTCTCAGAATTCAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCTAGCTGAAAGATCGCCTGGACTCCTTGATTTTCATCAAGACCTTGTTAGCCTGGAAGCTGCCACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAAGAGCTTGCTGCATCTGAAAATGATGGACCCGTGTCTGAAGTTTTCCGTAAGACATTGAAAGGATTCATAGCTGGAGCAGAGTCAGAGGGTAGAAATGCAGATGCACTGCACTATATTTTGGTGAGGATCCTGCTCGATGCCCATTTGAGCAAGGTGTGGCCGTGTGGGAAAAGTAGTGATATGTTCTCCTTTACTACAACTCTCCTAAATTTCATAAGGTTGTTCCGGAAAGCCCATGAAGAGAATTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCCGTGAAAGAGGCCGAATGGAGAAGGCTAAGGGCATCAACTTGA 2280 0.4947 MEDAKTRSLSAPVVSASVVSMDMKNDLKSRKVATSKSSGYIVAEIDAKHPPSPLPSIKELQSATQAQQRSSEQVLQPPQPSPPPSPSHASNSSHIFEPLSLQEDVSLQASPSPPVTPSSLGGKGSIAPPAVTTGPPPHPCFFTSFTGQKGAYYIPHPPPFLKLTAVPLQGHCLLHRPHHCLLQAKHHHPPLHLSPQPPPHLLLVCPPPPPPPPPFQYPPPPPPPILLVVLHHHHSTSFSSAPPHHLPPPFSRVPPPPPPLLLVVLPPPPPPPPFSRAPPPLTTFTPPFSKAPPPPPPLLLVKRSSHLLLLVILLSPLHLLLVMLLLTTSTSFMEPPPPPPPPPSLEHHHLPPPPCVSTTPPPPPCMELHLHHHLLVVEPPPPPLLVLEGPPPPPLPGAPRPLVVHLPTSALRFQRCKVGADPSVECRGYARPAGAVQWHPVILLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSIKLEKLFLRECSKNLLIQVANLEGDASLLDLKTDKVQLIDLRRANNTEIMLTRLRMPLPDMMVENLIKFWSYKRGDGTFEGYTGDKGIWGSVNRCQGVESKLEYSLSNSVWVSEFKKSLNTVNSACEEVLAERSPGLLDFHQDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQELAASENDGPVSEVFRKTLKGFIAGAESEGRNADALHYILVRILLDAHLSKVWPCGKSSDMFSFTTTLLNFIRLFRKAHEENCKQAELEKKKAVKEAEWRRLRAST 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00129 759 Coils Coil 729 749 - -
Sebi110g00129 759 PANTHER FORMIN-J 291 608 - -
Sebi110g00129 759 Gene3D Formin, FH2 domain 437 549 IPR042201 -
Sebi110g00129 759 MobiDBLite consensus disorder prediction 105 119 - -
Sebi110g00129 759 MobiDBLite consensus disorder prediction 57 75 - -
Sebi110g00129 759 Pfam Formin Homology 2 Domain 607 693 IPR015425 -
Sebi110g00129 759 Pfam Formin Homology 2 Domain 444 541 IPR015425 -
Sebi110g00129 759 Gene3D Formin, FH2 domain 571 757 IPR042201 -
Sebi110g00129 759 MobiDBLite consensus disorder prediction 43 93 - -
Sebi110g00129 759 SUPERFAMILY Formin homology 2 domain (FH2 domain) 447 746 - -
Sebi110g00129 759 Coils Coil 634 661 - -
Sebi110g00129 759 MobiDBLite consensus disorder prediction 105 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00129 Sebi-Chr110 1669378 1681194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00129 427 757 FH2 protein (formin) Gene Family AT5G07740 37.799 1.91e-51 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00129 - - zju:107419218 286.189