Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00128 ATGTTCCATACTGCATTTGTGCGGTCAAATACATTGATGCTGAGCCGTGATGAAATTGATATTTTGTGGGATGCCAAGGATCAATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAAACACAGCCACGGTGAGTGAGATGCAAATGAGACTGAAAGTGCTGAGACAGAAAGACTGTACACCAGATGATGGGATTCACAAACAAGTTGGCAAGATGGATTCTGGTATTAGTGTGGTGAAAGATATCTCTGTTGATGATGTGAACTACATGTTCAATGAGAACATGGATTCAGATCCTCATGCAGTAAAGGACATTGCCGTGGATGATGGAGAAATTAAGTCAACTTTCACTGCAGTCACTTCTGATGTGATGAAGCCTCTGGAAACAAAGGAAGTCACTGTGGATGTGCACCAGGAATTAGCAATTCTGCAAACAAATGTGATGAAGACAATGAAGCAACGGAAAAGGAATTAG 504 0.4167 MFHTAFVRSNTLMLSRDEIDILWDAKDQFPKDFKAEVLFLDADAVIPDLNTATVSEMQMRLKVLRQKDCTPDDGIHKQVGKMDSGISVVKDISVDDVNYMFNENMDSDPHAVKDIAVDDGEIKSTFTAVTSDVMKPLETKEVTVDVHQELAILQTNVMKTMKQRKRN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00128 167 PANTHER FORMIN-J 1 115 - -
Sebi110g00128 167 ProSiteProfiles C2 tensin-type domain profile. 1 42 IPR014020 -
Sebi110g00128 167 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 39 IPR035892 -
Sebi110g00128 167 Gene3D - 1 45 - -
Sebi110g00128 167 Pfam C2 domain of PTEN tumour-suppressor protein 1 39 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00128 Sebi-Chr110 1668310 1669066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00128 1 124 FH2 protein (formin) Gene Family AT5G07740 39.474 8.17e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00128 - - gmx:100785475 200.29