Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00099 ATGGTTACCTTCAGGTATCACCAATACCAGGTTGTGGGGAGAGCTCTTCCTACTGAAAATGATGAACATCCTAAGATCTACAGGATGAAGCTTTGGGCCACCAATGAGGTCCATGCCAAATCCAAGTTCTGGTACTTCTTGAGAAAGCTAAAAAAGGTCAAGAAAAGCAATGGGCAAGTGCTGGCCATCAACGAGAAACAAACCCCTAATCTCCTCCAGCTCTCCAAGACTCCAGCCCTCCTACCTGTGCGCCGCGGCGCCTCTGCAACCGTTCTTCTCTGCTTCGTTCACCGGCGCCACCTCTGCACAGCGGCCAACGTTCTTCTATGCTCCGTGAGTCCGTTCATCGACACCATCTCTGCAGCCGCGCGCGTTCTTCTCGTTCTGCAGGTTGCTACTCTGCTGGCTACAAAAACTGGTTTCTCGTTCTGTTGGCTACTCGTTTTCTACCGGTCGCTGTTGCCTCTGTTGGTTGTTGTTCAGTTCAACTCTTCAAGGCATGTTTGGTTTTTTTAG 516 0.5058 MVTFRYHQYQVVGRALPTENDEHPKIYRMKLWATNEVHAKSKFWYFLRKLKKVKKSNGQVLAINEKQTPNLLQLSKTPALLPVRRGASATVLLCFVHRRHLCTAANVLLCSVSPFIDTISAAARVLLVLQVATLLATKTGFSFCWLLVFYRSLLPLLVVVQFNSSRHVWFF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00099 171 Hamap 50S ribosomal protein L18Ae [rpl18a]. 6 66 IPR028877 -
Sebi110g00099 171 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 7 66 IPR023573 GO:0003735|GO:0005840|GO:0006412
Sebi110g00099 171 FunFam 60S ribosomal protein L18a 1 70 - -
Sebi110g00099 171 Gene3D - 1 69 - -
Sebi110g00099 171 PANTHER 60S RIBOSOMAL PROTEIN L18A 4 66 IPR028877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00099 Sebi-Chr110 1313804 1315074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00099 1 65 Cytoplasmic Ribosomal Protein Gene Family AT3G14600 87.692 3.28e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00099 K02882 - tcc:18596518 134.035