Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00094 ATGGCATCATCAGCAAAGCGATGCCATTACGAAGTGCTGGGTCTTCCCCGAGACTGCACCCCCGACGAGATCCGATCAGCTTACCGCCGTCTCGCCCTTCAGCGCCACCCTGACAAGCTCGTCCAATCCGGTATCTCCCAATCCGAAGCCACCGCTCAGTTTCAGGAGCTGCAACAGGCCTACGAGGTCCTCTCCGACCCTAAGGAGCGTGCTTGGTACGACTCTCACCGTTCCCAGATCCTCTTCTCCGATCCCGATTCCCTTGGCAAAAACTCCGTCGTCCCCGACCTCTTCTCCTTCTTCTCCAACACTGTCTATTCCGGCTACTCCGATTCCGGCAGGGGTTTCTACAAGGTCTATTCCGATGTCTTTGACAAAATCCACGCCAACGAGATCAACTTCGCCAAGAAAATGGGGATTGGTGTTGATGCGGTTCGACAAGCCCCTGTTATGGGGAACTTGGATAGCCCCTATGAGCAGGTTACGGCGTTTTACGGTTACTGTGATCATTTAGGGGAGGCTGATTATGGGGTTGGTGATTTGGATGGGAGGTTTAGAGATGGTCTCAATGTTGCAGAAGGGGAGGATAGAAATGGGGATGAAGTGAATGATGATGGTGATGATTTTTTTTGTGCACCACATGCAGATGGTGAGGAAGTGGATGTGTCAGTTGATTTTGATGATGTTGATGAGGATGATGATGAAAATGGTTTTCTTGAAGCAATGGTAGCTGGGCACAAGAACAGAAAACCTAGTGCTTCAACACATAAGCCCAAGGCTTCAGTAACTCCAACTCAAATTGAGCATGAGAACGATGAGGTTAACCCAATGGAATATAACAACCGAAAGAGCTCAAGAAAGAAACGAGGAGCCAAGAAAGAGAAAGGTAGGAGGAATTGGGAAGAATCTAATGAGGCTGCTGTCAATGGCAATTGTGAGAATATGAACAGCAATAGAAATGATAATTCTTTTGGAGAAGAGTCTACTTCCCAACATTTTGTGGAAAATGAGGGTAATGGTAAAGAGAATGAGCAGGTGGACAGAGATAACAAGAGTTCAAATCAACCAGCTGATAAAAAAGGAAATTCAAAGGACACAAAAACCAAAGCAAAAATTTCATCCAAAGGAAGAAAAGGAAAGGTGGCATCAAATAATCTTGGCAATACTTGCGGGACATGTGGAGAGGAGTTTGAGTCAAGTAACGTAGCATTTCTCGAGTAA 1221 0.4644 MASSAKRCHYEVLGLPRDCTPDEIRSAYRRLALQRHPDKLVQSGISQSEATAQFQELQQAYEVLSDPKERAWYDSHRSQILFSDPDSLGKNSVVPDLFSFFSNTVYSGYSDSGRGFYKVYSDVFDKIHANEINFAKKMGIGVDAVRQAPVMGNLDSPYEQVTAFYGYCDHLGEADYGVGDLDGRFRDGLNVAEGEDRNGDEVNDDGDDFFCAPHADGEEVDVSVDFDDVDEDDDENGFLEAMVAGHKNRKPSASTHKPKASVTPTQIEHENDEVNPMEYNNRKSSRKKRGAKKEKGRRNWEESNEAAVNGNCENMNSNRNDNSFGEESTSQHFVENEGNGKENEQVDRDNKSSNQPADKKGNSKDTKTKAKISSKGRKGKVASNNLGNTCGTCGEEFESSNVAFLE 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00094 406 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 1 167 IPR044648 -
Sebi110g00094 406 MobiDBLite consensus disorder prediction 337 372 - -
Sebi110g00094 406 SUPERFAMILY Chaperone J-domain 4 80 IPR036869 -
Sebi110g00094 406 ProSiteProfiles dnaJ domain profile. 8 77 IPR001623 -
Sebi110g00094 406 SMART dnaj_3 7 69 IPR001623 -
Sebi110g00094 406 MobiDBLite consensus disorder prediction 255 270 - -
Sebi110g00094 406 MobiDBLite consensus disorder prediction 245 392 - -
Sebi110g00094 406 CDD DnaJ 8 66 IPR001623 -
Sebi110g00094 406 Gene3D DnaJ domain 1 87 IPR036869 -
Sebi110g00094 406 PRINTS DnaJ domain signature 28 43 IPR001623 -
Sebi110g00094 406 PRINTS DnaJ domain signature 49 69 IPR001623 -
Sebi110g00094 406 PRINTS DnaJ domain signature 10 28 IPR001623 -
Sebi110g00094 406 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Sebi110g00094 406 MobiDBLite consensus disorder prediction 378 392 - -
Sebi110g00094 406 Pfam DnaJ domain 9 74 IPR001623 -
Sebi110g00094 406 MobiDBLite consensus disorder prediction 304 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00094 Sebi-Chr110 1214472 1217063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00094 1 167 C2H2 Transcription Factor Family AT1G74250 67.816 1.07e-80 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00094 K09506 - gmx:100788305 303.138