Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00080 ATGACTGAAAATTCAAGTAAAGGTTATCAACAAAAGCAAGAGGGTGATGGCGTTAAAATTAAGAACTTCTCTAAGGCACCCTCAAGACAATGGTCATTATACAGAAATCCAAGGATTGTGAGAGTGTCACGTTCCATGGGAGGAAAAGACAGGCACAGCAAGGTCTGCACCATTAGTGGACTGAAGGACCGTCGCATTAGGTTGTCTGTACCCACAGCACTTGAGTTATATGATCTTCAAGACAAACTTGGACTCAGTCAACCAAGCAAGGTGGTAGATTGGTTACTTGAAGTCACCAAATATGAGATTGATAAGCTTCCACCACTTCAAATCCCTCAATGTTTTACTCAGTTTCATCATCAAACCCTACTGCCTCATCATCATGAAGCAGGTACCTTTAAGCTTTCTCTTGCAGGGTTACGTGATGTTAGTTCCATATCTACAAAGGATGCAGGAAATCAAAACCTCATGGCAATGTCAAGGTATTGGGATATAGATTCAGTGTCTAATTCCACATTTATGAAGGATGTAGGAAATCAAAACCTCATGGCAAAGTCAAGGTATTGGGATATAGGTTCAGTGTCAAAACTAAAAGGTAAGGAAGCTGAGAGTGACTCTATCTCAGGAAAAGGCAAGTGCTGGATAAAAGCAAATGAACAAGAAAATCAAGGTTCAGCTCATAAGCTCTTCCCCATTGGGACTGATAACCCTTCTTTATCTGGTTTGTTAAACAATTCCATGACATATAACCCCTATCAGACTTCATGTCTATCTTTATCCCAATTTGGAAGGCATGGATTATTTACTAGCCAGGTAGATTCCCATCCCAGCAGTGGCAGTGCCGTGCAATTTTCATCTTCTGTGTCTGTACCATCTAATTCTCAGTTACTTTTTTATCCATCTTCTGCTATGTCATCACTTTTTACCCCGCACACTCCATTTATGGTCAACTCAATGGAAAGTTCTCAAGTCATGCCTCATCCTCTCATTCCACCTCTTCATCCAATCAATTCACCTTTTAGACTCATCCCAACACCATTTAGTTCCAAGCCTCTTGCTTCAGTTAATAACAACAATCCCAACTAG 1086 0.4061 MTENSSKGYQQKQEGDGVKIKNFSKAPSRQWSLYRNPRIVRVSRSMGGKDRHSKVCTISGLKDRRIRLSVPTALELYDLQDKLGLSQPSKVVDWLLEVTKYEIDKLPPLQIPQCFTQFHHQTLLPHHHEAGTFKLSLAGLRDVSSISTKDAGNQNLMAMSRYWDIDSVSNSTFMKDVGNQNLMAKSRYWDIGSVSKLKGKEAESDSISGKGKCWIKANEQENQGSAHKLFPIGTDNPSLSGLLNNSMTYNPYQTSCLSLSQFGRHGLFTSQVDSHPSSGSAVQFSSSVSVPSNSQLLFYPSSAMSSLFTPHTPFMVNSMESSQVMPHPLIPPLHPINSPFRLIPTPFSSKPLASVNNNNPN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00080 361 MobiDBLite consensus disorder prediction 1 21 - -
Sebi110g00080 361 ProSiteProfiles TCP domain profile. 48 106 IPR017887 -
Sebi110g00080 361 Pfam TCP family transcription factor 48 119 IPR017887 -
Sebi110g00080 361 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 322 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00080 Sebi-Chr110 1058495 1059580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00080 32 315 TCP Transcription Factor Family AT5G60970 38.356 1.06e-43 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sebi110g00080 TCP 8.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00080 - - gmx:100804574 307.375