Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00068 ATGCATAGTCTGAGAATGCTCCAATTCTACAAGTCTTCTGGATTTTGGGAACACTCAAATGTGATCCTTCCTGCATTTCTTGAAAGTCTTCCGGATAATTTAAAATTTCTTCGTTGGGATGGCTTTCCTCAAAGAACTTTGCCGCTAGACTTTTGCCCAGAAAACCTTGTTAAACTTGATATGCGTAATAGCCATCTTGAACAACTTTGGGAGGGAGATCAGGATTTACCGAATTTGAAAAGCCTCAATCTTAGTTTTTCTCGGAAGCTGATTCGAATACCAGACCTCTCTCTATCTCCAAAAATTGAAGAAATAATTCTTAGTCATTGTGAAAGCTTGGTTCAAGTTTACTCCTCGAGTTTCCTCAGCAAACTCAACTGTTTATTTTTAGATGGTTGCATTGAGCTTAGGAATTTAAACCTTCCCAGCAACATTCTATCGGGATCTTCTGGATTAGTTGTTCTATGTAAGTGTCGCAAGCTTGAAACATTTTCAATCAGCAGTAGAACTGAGGCGGTTCAATCATACAATTGTTTGCGTTGTGATGGATTCTGGGGAGCAGTAGAAATTTTCCGTGAAGCAAAAGTTAACCTATATAATGGAAATCTTATCCGGTTCAATGGAAAAGGTGGCATGAGATATTCTTCAGATACTTTTGACCCCATTATTTGTGCTGACAGATATGAAAAAGAAGAAGTGGCAGATAATGTACGCTTACTAAACATGAAAGTGATGATAGAAACTATGCCTTCATTATTTCCAAGTCTCAATGAGCTTTGTTGGTTAGATATATCTGATTGTGAATCCCTTACAAGCCTTCCAATGGACCTTTGTAAGTTGAAATTTCTAAGAAGACTTTATCTCCGTGGTTGCTCAAATTTGGAAAATTTCCCTGAAATCAAGGAGACAATGGAAAATTTAACGGTGCTCATCTTAGATGAAACAACAATAAAGGAGCTACCTTCATCCTTGCACCATTTGGTAGGGCTTGAAGTATTGAGCTTGCATAATTGCTCGAGGCTTGAGATTATTCCATCTTCCATTGGAAGTCTCATTAAACTCTGCAAGTTAGACCTTACTTGCTGTGAATCACTAGAGACTTTTCCAAGCAGCATTTTCAAATTGAAATTAACAAAACTTGATTTGCGTGGTTGCACAATGCTAAAGAGATTCCCAGAGATCTTGGAGCCTACAGAAAGTTTTGTTCACATTAGCTTAACAAAAACAGCAATTAAAGAACTACCTTCATCATTGGACTATTTGGTTGGGCTTCGAACCTTGCGTCTGAACCTATGCAATGATCTGGAGTCACTTCCAAATAGCATTGTTAATCTAAACCATCTCTCTGAGCTTGATTGTTCAGGCTGTGGCAAATTAACAGAAATCCCAAATGATATAGGTCGCATGTCATCATTAAAAGAATTTTCACTGCAAGGAAGCAGTATTGTGAACCTTCCTGAGAGTATTGCTCTTCTTTCAAGCTTGAAATCACTTGATTTAAGTGATTGCAAAAAGCTTGAATGTATCCCACAACTTCCACTATTTCTGAAACAGTTATTGGCGTTTGATTGCCCATCCATTAGAAGAGTGATGTCAAATTTAAGGCTTGAACTCCCATCAGATTCCAAAGAGGGTACCTTTAAATTTCATTTCACCAATAGTGAAGAACTTGATCCAAGTGCTCAAAGTAATATTATGGCTGATGCATGGCTTAGGATCACTGAGGATGCATATAGGTCTGTGTTCTTTTGTTTTCCAGGAAGTACAGTTCCTCATTGGTTCCCTTATCGCTGTGGGGGACATTCAATAACTGTGAATAAGGATTCTCTAAATTGGTGCAATGAAAATAGGCTCATTGGTTTCGCCCTATGTGTCGTTTTGGAACTTAAAGATATGGATGATACAGAACGAAGATGTGGATCTGGTGTTTTTAGATACAGATTAACATTTGAATATGATGGTTGGAAAAACAGTCTTCCCAACCATGATGAGCTAAGAAACTATTTCTATTGGAAGGGTCGAGAGAGGTTTGTTGCCCAAGATCACATATTCCTATGGAAATATCACTTGGACTCTTCAAGTATCAATGAGGGGCTCTTTCATGCCAACAACTTCACGTTTAAGATCAGCAAATATAATGATGGTAGCTTTCAGCGGTCATATTTTAAATCAATTGCCATGAATCAGAAGTACTATGGTTATGACATTTCCATTGGTCCACCATGTCAGTATAGGTTGACTTGCTTTGTTCTCTCATTAACCACAGTTTCCTCAAACTGTTACAATTTTGGCTCCATAAACTTTCAAGCATCAAGACAGGATGTCGCCAAATTTGGTGGCTTGCAATACAGCAAGGGCAATATCAATTCTTGA 2373 0.3805 MHSLRMLQFYKSSGFWEHSNVILPAFLESLPDNLKFLRWDGFPQRTLPLDFCPENLVKLDMRNSHLEQLWEGDQDLPNLKSLNLSFSRKLIRIPDLSLSPKIEEIILSHCESLVQVYSSSFLSKLNCLFLDGCIELRNLNLPSNILSGSSGLVVLCKCRKLETFSISSRTEAVQSYNCLRCDGFWGAVEIFREAKVNLYNGNLIRFNGKGGMRYSSDTFDPIICADRYEKEEVADNVRLLNMKVMIETMPSLFPSLNELCWLDISDCESLTSLPMDLCKLKFLRRLYLRGCSNLENFPEIKETMENLTVLILDETTIKELPSSLHHLVGLEVLSLHNCSRLEIIPSSIGSLIKLCKLDLTCCESLETFPSSIFKLKLTKLDLRGCTMLKRFPEILEPTESFVHISLTKTAIKELPSSLDYLVGLRTLRLNLCNDLESLPNSIVNLNHLSELDCSGCGKLTEIPNDIGRMSSLKEFSLQGSSIVNLPESIALLSSLKSLDLSDCKKLECIPQLPLFLKQLLAFDCPSIRRVMSNLRLELPSDSKEGTFKFHFTNSEELDPSAQSNIMADAWLRITEDAYRSVFFCFPGSTVPHWFPYRCGGHSITVNKDSLNWCNENRLIGFALCVVLELKDMDDTERRCGSGVFRYRLTFEYDGWKNSLPNHDELRNYFYWKGRERFVAQDHIFLWKYHLDSSSINEGLFHANNFTFKISKYNDGSFQRSYFKSIAMNQKYYGYDISIGPPCQYRLTCFVLSLTTVSSNCYNFGSINFQASRQDVAKFGGLQYSKGNINS 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00068 790 Gene3D Ribonuclease Inhibitor 1 200 IPR032675 -
Sebi110g00068 790 Pfam C-JID domain 585 724 IPR045344 -
Sebi110g00068 790 Gene3D Ribonuclease Inhibitor 235 376 IPR032675 -
Sebi110g00068 790 SUPERFAMILY RNI-like 34 313 - -
Sebi110g00068 790 Pfam Leucine Rich Repeat 55 74 IPR011713 -
Sebi110g00068 790 SUPERFAMILY L domain-like 244 525 - -
Sebi110g00068 790 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 408 512 - -
Sebi110g00068 790 Gene3D Ribonuclease Inhibitor 377 535 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00068 Sebi-Chr110 892586 895453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00068 357 509 WRKY Transcription Factor Family AT5G45050 31.282 1.16e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00068 - - lja:Lj4g3v3113360.1 1088.56