Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00057 ATGTCAGACCCTAGTCATGCAATTGCTAAAGCTGTGGTTGCTACAGCTGTGGCAATGTTATTCATTGCAGGGATTTTCTTTTACTTCCTCCAAAAATTTGTTCTTGCTAGGTACCACCAGAGACACAAAGTTGCTGCAACTTATCTTCGAGAACAAGGAGTGAACCATGAAGATATAAGAAAAGCTGGTGGTAATGTGAAAGCACTAATAGTAGAAGAAAATGGGGTTGATATTCTTTATATGATGGACACAGAAAGTAGACAATTGATAACTGGTTTCCCAAATAGCATGTTCAATCCAAGTTATGAAGATGATGAAGAAGAAAAGAGAATAATAGATGTCATGGTCCAAAGGTCCAAAATGTCCATGCCTCATGAGACTCCAATGGCATGTGAATCTCCAGGGTTGAATGGTCATCAAAATCTAGTTAAACCAGTATCACAAGGCAAAGGTTTTATTTCATCACTGAAACCCCCACCAGTGCCTAAAGTGAAAGCAAACATCAAAAACACCAAAGAGGGTACAATAGGGGAGAGCTCAAGAGAAAAGGGTGCTGGCCAAACTAGGCTGAAGCCTCTACATTGGGATAAGGTTGTAGCTAATGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTTCGGTTTGATGATGAACTCATGGAATCACTCTTTGGATATTCAACCAATGATAAAACCAATGAAAGAAGCATGAGTGTTTCAACTTTGGCCAAGTCTAATTCCAACACACCAACTCAAATATTCATTCTGGAGCCAAGAAAATCTCAGAACACAGCAATTGTTCTGAGATCACTAGCAGTTTCCCGCAAGGGAATCTTGGATTCATTACTTGATGGTCAAGGACTCAGTGTTGAGACACTTGAGAGACTCACTAAGATAGCTCCCTCTCAAGAAGAAGAAGCCAAAATTATCCAATTCAATGGCAACCCTGATAAGCTTGCTGATGCTGAGTCTTTCCTATACTACATTCTGAAGGCAGTTCCAACAGCATTCAATCGTTTGAAAGCAATGCTTTTCAGGTCCAATTATGATTGTGAAGTTCTTCAGCTCAAGGAACACCTACAAACACTTGAATTGGGTTGTAAGGAACTGAGGACTAGTGGCCTTTTTCTGAAACTCCTTGAGGCTATTCTCAAAACTGGGAACAGGATGAATTCTGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTCAGCACTCTTAGAAAACTTTCTGATGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTCATTGTGGAACAAGTAGTTCAATCAGAAGGGAAAAGGCAAGCTATAAATAAAAAGCACAACTTTCTCATAAGCAATGGTGAAACAAGCAATATGATACAACAAGAGGAAGATAGAGAATATCTAATGCTTGGTTTACCAGTGTTAGGTGGGCTAAGTGATGAGTTATCTGAAGCAAAGAAAGCTGCTAGCATTGAGTATCACAATTTCATCACTATGTGTTCCACTCTCAGTGCTCATGTTGTTGAAATTCGACAGATTATAACATGCTGTGGCAACACTGAGAGAGGTGGATTCATCAAGGAAATGAAAGGGTTCCTAGAGGAATGTGAGGAGGAGCTTAAGGTGGTGAAGGAGGAACAGACAAGGATCTTGGAGCTTGTGAGAAAAACGAATGAGTACTATCTAGCAGGTGCATCTAAAGACAATATGTCAAACCCCTTTCAGCTGTTTGTTATTGTAAAAGATTTTGTTGACATGGTAGATCAGGCTTGCATAGAACTTAAAAGGAAGCTAGAAAAGAAGAATGTAGGAGTAGAGGCTTTATCAACACCACCTTTGTCACCATCAAAGAGGGCACCACTCAGATTCCCTAACTTTGATTTATATTTTCTGTCAAATAAGTCAGAAACTACATATTCAAGCCAATCAGAAGATGATTTCTGA 1947 0.397 MSDPSHAIAKAVVATAVAMLFIAGIFFYFLQKFVLARYHQRHKVAATYLREQGVNHEDIRKAGGNVKALIVEENGVDILYMMDTESRQLITGFPNSMFNPSYEDDEEEKRIIDVMVQRSKMSMPHETPMACESPGLNGHQNLVKPVSQGKGFISSLKPPPVPKVKANIKNTKEGTIGESSREKGAGQTRLKPLHWDKVVANVDHSTVWDQINDGSFRFDDELMESLFGYSTNDKTNERSMSVSTLAKSNSNTPTQIFILEPRKSQNTAIVLRSLAVSRKGILDSLLDGQGLSVETLERLTKIAPSQEEEAKIIQFNGNPDKLADAESFLYYILKAVPTAFNRLKAMLFRSNYDCEVLQLKEHLQTLELGCKELRTSGLFLKLLEAILKTGNRMNSGTSRGNAQGFNLSTLRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQAINKKHNFLISNGETSNMIQQEEDREYLMLGLPVLGGLSDELSEAKKAASIEYHNFITMCSTLSAHVVEIRQIITCCGNTERGGFIKEMKGFLEECEEELKVVKEEQTRILELVRKTNEYYLAGASKDNMSNPFQLFVIVKDFVDMVDQACIELKRKLEKKNVGVEALSTPPLSPSKRAPLRFPNFDLYFLSNKSETTYSSQSEDDF 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00057 648 Pfam Formin Homology 2 Domain 185 588 IPR015425 -
Sebi110g00057 648 Coils Coil 527 554 - -
Sebi110g00057 648 SUPERFAMILY Formin homology 2 domain (FH2 domain) 193 602 - -
Sebi110g00057 648 PANTHER FORMIN-RELATED 5 626 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sebi110g00057 648 SMART it6_source 180 603 IPR015425 -
Sebi110g00057 648 Gene3D Formin, FH2 domain 202 608 IPR042201 -
Sebi110g00057 648 ProSiteProfiles Formin homology-2 (FH2) domain profile. 180 614 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00057 Sebi-Chr110 796523 798758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00057 8 646 FH2 protein (formin) Gene Family AT1G70140 39.691 1.69e-166 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00057 - - gmx:100791689 897.501