Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00025 ATGGCTAAAGTCTTCATTATTGAGGAGCTAAAGGAGGCCACCAACAACTTTGATGAAAGCAAGATCCTAGGCCAAGGAACAGTTTACAAAGGATTATTACTAGATAACAGAATTGTAGCAATAAAAAAGTCCAAAATTAATGACCTAAAACAGATTGAGCAATTAATCAATGAGGTCATTGTGCTTTCCCAAATCAACCATAGGAATGTGGGGACATTGGAGTATCTTGACCCAGAGTACTTTCACACAAGCCAGTTAACAGAGAAAAGTGATGTCTATAGCTTTGAGGTTGTCCTAGCAGAGCTACTAACAGGAAAGAAGGCACTCTCTTTTGACAGGCCAGAGGCTGATAGAAATCTTGCAGTGTACTTTGCTTCTTCAATGAAAGAGGGTCAACTACTTCATATCGTGGAGAACCACATGATAGATAAGAAAAATGTTGAGAAACTAATTGGAGTTGCCAATATTGCAATACGTTGTTTAATGATGAAGGGAGAGGAGAGACCCACCATGAAGGAAGTGGCAATGGAACTTGAGGGACTAAGAGGTATGGAAAAGAACAAATGTGAAAGTGTTAATTTATCTTCAGAAGAGATTGGAAACTTGCTCAAAGCAGCACCATTTGTTTTCAATGTTGAAGATGGCGCTGGTGGAAGTGGCATTACTCCTGGACCTGGTTTTGATAGTTTAAATTGTATTTCAATGTCATTGAGTGGTGAAAGATGA 726 0.3898 MAKVFIIEELKEATNNFDESKILGQGTVYKGLLLDNRIVAIKKSKINDLKQIEQLINEVIVLSQINHRNVGTLEYLDPEYFHTSQLTEKSDVYSFEVVLAELLTGKKALSFDRPEADRNLAVYFASSMKEGQLLHIVENHMIDKKNVEKLIGVANIAIRCLMMKGEERPTMKEVAMELEGLRGMEKNKCESVNLSSEEIGNLLKAAPFVFNVEDGAGGSGITPGPGFDSLNCISMSLSGER 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00025 241 Pfam Protein tyrosine and serine/threonine kinase 73 178 IPR001245 GO:0004672|GO:0006468
Sebi110g00025 241 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 70 IPR045274 GO:0007166
Sebi110g00025 241 SUPERFAMILY Protein kinase-like (PK-like) 3 175 IPR011009 -
Sebi110g00025 241 Gene3D Phosphorylase Kinase; domain 1 1 71 - -
Sebi110g00025 241 Gene3D Transferase(Phosphotransferase) domain 1 72 205 - -
Sebi110g00025 241 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00025 Sebi-Chr110 356443 357491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00025 3 70 Receptor kinase-like Gene Family AT1G21230 64.789 1.39e-22 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sebi110g00025 PK_Tyr_Ser-Thr 1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00025 - - gmx:100798027 211.46