Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00019 ATGGGCATGGATTACTATAACATACTGAAAGTGAATCGAAACGCCAGCGACGAGGATTTAAAAAAGGCCTACAAGAGGCTCGCCATGATATGGCACCCTGACAAGAACCCCGTTAACAAGAGCGAGGCCGAAGCCAAATTCAAGCGAATCTCCGAAGCCTACGACGTTCTCAGCGACCCGCAGAAGCGTCAGATCTACGATCTCTACGGCGAGGAGGCACTCAAGACCTCAAATGGCGCTGCGTTTGGCGGACCGGGAAGGAAGGCACCGGCGGTGGAGAACGTGTTACCGTGTAGCTTGGAAGACCTTTACAAAGGTGTCAAGAAGAAGATGAAGATCTCAAGGAATGTCTATGACGCTTTTGGGTAA 369 0.5095 MGMDYYNILKVNRNASDEDLKKAYKRLAMIWHPDKNPVNKSEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKTSNGAAFGGPGRKAPAVENVLPCSLEDLYKGVKKKMKISRNVYDAFG 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00019 122 SUPERFAMILY Chaperone J-domain 3 83 IPR036869 -
Sebi110g00019 122 Pfam DnaJ domain 4 67 IPR001623 -
Sebi110g00019 122 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Sebi110g00019 122 SMART dnaj_3 3 62 IPR001623 -
Sebi110g00019 122 CDD DnaJ 4 59 IPR001623 -
Sebi110g00019 122 Gene3D - 90 121 - -
Sebi110g00019 122 PRINTS DnaJ domain signature 62 81 IPR001623 -
Sebi110g00019 122 PRINTS DnaJ domain signature 24 39 IPR001623 -
Sebi110g00019 122 PRINTS DnaJ domain signature 42 62 IPR001623 -
Sebi110g00019 122 PRINTS DnaJ domain signature 6 24 IPR001623 -
Sebi110g00019 122 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Sebi110g00019 122 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 119 - -
Sebi110g00019 122 Gene3D DnaJ domain 1 82 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00019 Sebi-Chr110 263688 264251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00019 5 74 C2H2 Transcription Factor Family AT1G74250 35.135 3.79e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00019 K09510 - qsa:O6P43_030948 215.312