Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi110g00014 ATGGGCATTGCACTTGTCATAATCCTTTCATTACTCTGGATTTGTTTGCTATCAAAAAAGGAAAGAGCTGCTAGGAGATACAAGGAAATAAAGAAACAAGTCAATCAAGAATCAAATAGAAAAGAAGGCACAAAACTTATTACCTTCCATGGTGATCTTCCATACTCATCATCTGAGATCATAGAAAAGTTGGAGTCTCTTGATGAAGACGATGTGGTAGGTTCTGGAGGATTTGGTACTGTTTACCGAATGGTGATGAATGACTGTGGTACATTTGCTGTTAAGCGGATTGATAGAAGTCGCGAAGGTTCTGATAAGGGGTTTGAAAGGGAACTAGAGATCTTGGGTAACATCAAGCACATAAATCTAGTAAACCTGCGTGGTTACTGCAGGCTCCCTTCTACAAAGCTTCTAATCTATGATTATTTGGCCATGGGCAGCTTAGATGATCTCTTGCATGAAAACACTGAACAACTACTGAATTGGAGTACTCGCCTAAAGATAGCCCTTGGTTCTGCCCGGGGGTTAGCTTACTTGCACCATGACTGCTGCCCAAAAATTGTGCATCGTGACATAAAATCCAGCAACATCCTTCTTGATGAAAACATGGAGCCTCATGTCTCTGATTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCTCATGTTACAACAGTGGTTGCTGGCACATTTGGCTATTTGGCACCAGAGTATCTACAAAGTGGAAGAGCCACTGAGAAGTCAGATGTGTATAGCTTTGGAGTTCTATTGCTAGAACTTGTAACTGGAAAGAGACCTACAGATCCTTCCTTTGCAAAGAGAGGTTTAAATGTTGTTGGTTGGATGAACACGTTACTGAGAGAAAACAGATTGGAAGATGTGGTAGACAAAAGATGCAGTGATGCAGAATGGGAATCTGTTGAAGTAATTCTTGAGCTAGCAGCAAGTTGTACAGATGCAAATGCAGATGATCGTCCTACAATGAATCAGGTATTACAGTTGCTGGAACAAGAGGTCATGTCTCCTTGCCCAAGTGATTTTTACGAGTCACATTCAGATCACTGTTAG 1068 0.412 MGIALVIILSLLWICLLSKKERAARRYKEIKKQVNQESNRKEGTKLITFHGDLPYSSSEIIEKLESLDEDDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDKGFERELEILGNIKHINLVNLRGYCRLPSTKLLIYDYLAMGSLDDLLHENTEQLLNWSTRLKIALGSARGLAYLHHDCCPKIVHRDIKSSNILLDENMEPHVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFAKRGLNVVGWMNTLLRENRLEDVVDKRCSDAEWESVEVILELAASCTDANADDRPTMNQVLQLLEQEVMSPCPSDFYESHSDHC 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi110g00014 355 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 143 346 - -
Sebi110g00014 355 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524
Sebi110g00014 355 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 336 - -
Sebi110g00014 355 SMART serkin_6 67 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi110g00014 355 Gene3D Phosphorylase Kinase; domain 1 26 142 - -
Sebi110g00014 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Sebi110g00014 355 Coils Coil 17 40 - -
Sebi110g00014 355 Pfam Protein kinase domain 69 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi110g00014 355 ProSiteProfiles Protein kinase domain profile. 67 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi110g00014 355 SUPERFAMILY Protein kinase-like (PK-like) 47 336 IPR011009 -
Sebi110g00014 355 Gene3D Transferase(Phosphotransferase) domain 1 143 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi110g00014 Sebi-Chr110 205706 208548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi110g00014 1 344 Receptor kinase-like Gene Family AT2G35620 57.849 8.89e-143 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Sebi110g00014 Pkinase 7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi110g00014 - - gmx:100805042 655.21