Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1108g00005 ATGCCCAAAGGGTTACCACTAGAAGGTGCAGCGCCACTGCTATGTGCTGGACTCACAGTGTACAGCCCCATGATGCACCACGGACTGTGTCAACCTGGCCAGCATTTGGGTGTGGTGGGTCTAGGTGGTCTTGGTCATGTGGCTGTCAAATTTGCTAAGGCTTTCAATATGAAAGTCACAGTGATAAGTACTTCCCCTGGCAAGAAGAAGGAAGCATTGGAAAGGCTTGGTGCTGACTGCTTCTTGCTCATAAATGATCAACAACAATTGCTGGAAGTTTCAGGGCCACACTCACTCCACCCATTAGTTGATATGTTGAAGACATGTGGAAAATTGATTTTAGTAGGTGCATCAGTTACACCTCCTGTGTTTCCATATATGGCTTTGATGTTGGGGAGGAAGATAATTGCTGGGAGTGCTGGTGGAGGGACGAAAGAGAGCCAGGACATGATTGATTTTGCAGCAAAGCACAATATCACAACAGATATTGAGCTAATTCCCATGGATTATGTGAACACTGCTTTAGAACGAGTTGCCAAGAATGATGTTAAATACCGATTTGTCATCGATGTGGTCAACACTCTTAAGTAA 591 0.4501 MPKGLPLEGAAPLLCAGLTVYSPMMHHGLCQPGQHLGVVGLGGLGHVAVKFAKAFNMKVTVISTSPGKKKEALERLGADCFLLINDQQQLLEVSGPHSLHPLVDMLKTCGKLILVGASVTPPVFPYMALMLGRKIIAGSAGGGTKESQDMIDFAAKHNITTDIELIPMDYVNTALERVAKNDVKYRFVIDVVNTLK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1108g00005 196 Gene3D - 16 161 - -
Sebi1108g00005 196 FunFam Cinnamyl alcohol dehydrogenase 16 161 - -
Sebi1108g00005 196 Gene3D - 1 191 - -
Sebi1108g00005 196 Pfam Zinc-binding dehydrogenase 43 155 IPR013149 -
Sebi1108g00005 196 PANTHER ALDEHYDE REDUCTASE 1 194 IPR047109 GO:0016616
Sebi1108g00005 196 FunFam Putative cinnamyl alcohol dehydrogenase 6 162 191 - -
Sebi1108g00005 196 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 159 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1108g00005 Sebi-Chr1108 57580 58366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1108g00005 1 196 Monolignol Biosynthesis Gene Families AT4G37990 60.386 4.09e-65 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1108g00005 K23232 - qlo:115967174 281.952