Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1103g00007 ATGCAGAGACTCAAAGGAAGCAAGCAGGTTCGTCGACATAGAAAACAGAAGAGTTTTCCTTCCGATTCTGGTTCTTGTGGTAGTGGAGTAGCAGATGAAGATGCGAATTCACTTCAATTGGGATGGAGATCTTCGAAACAACAATTGGGAACTCCCATGAAGAAGTTATTAGCTGCAGAGATGTCCCGAGAAACTGAATCCAAAAGAAGAGCCCCTAGTGTTATTGCCAGATTAATGGGTCTTGATGGGCTTCCGTTGCAGTTGCCTAAGCAACATACAAGTTCCTCAGAAAACCATCTAAAAGGGTCAACACAAGTAGGGAAAACTCGAAGCAGTGGTACATTATATGATGGTCGATCATCTAGAAGAAGCTCAAAGGATCAGCAAGAGTTTAAGGATGTATTTGAGGTCTCTGAGATCCCAAAGGCACAGAGTAGTAGTAGGTATGCGTCGCAGGGGCCTGTGGACTTGAAGATCAGTGATGATGAAATGTCATTCATTGAACAAAAGTTCATGGATACCAAACGCCTTGCTACTTATCAGGATTTGCAGTCTTCACAGGATTCCCATGATACACTAGAGATCCTAGACTCTAACAATGATCTTCTGCAAAAAAGACACGCAATGCATATTTCACCAAAATCTTCAAAGATTCAGTTTAAGGGAAGAGAGGAACCTGATGCAGCCCCAACAAGGATTGTTGTCCTAAAACCTAATATTGGAAAAGTGCAGAATGCTACCAAATTTGTTTCATCACCTTGTTCTTCACATACTTTCCTGTCTGAGTTTGGAGAGCATGCTGAATTTTCAGATATCAGATTTAGGGACAATGAACTGAATCAAAAGAAAAATTTTCCCGGTACTGCCAGTGCTAGGCATTCAAGGCAAAATTCATGGGAATCCAGAGAAATTGCAAAGGAAATTACTAGCCAAATGAAAAATAGTCTGAATAATAGTTCCATGATATTTTCATCTTCTAGATTAAGAGGATATTCTTGGGATGGTAGCTCATGTAGTTTTTCTGGGAATGAATCTCCAGAGGAATCAGAGGTAACAACTGCAATTCTGGAAAATTCGCTTGACATAAGTAATACTCTCAGGCCATCATCCCATTGCGGTGAATCATCTGTTAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGTCGCACAAGTCTCAACAAGGCCAATCCATCTGCAGGAGCAACACATTGGCTGAAATGCTTGCTATCCCTGACAAGGAAATGAAAGCAGCTAACTTTGACAGCACCTCTCGGGGAAAAGTTTTCCATGATAAAGTTGCTAGCAGTGGTAAACCTGCTGGGTTGACTGAACCAGTCGGTATCAGCAGCAGGGATGGTTGGAAGGATGGATTTATTGGAAGTTTACCAAGGTCTAAGTCTCTTCCTGCTTCATCTACTGTCTTTGGAAGTCCCAGAGCAATCTTGCGCCATGAAGCACTTCGTGATGATCGATTTATGATGCCAAAGGAAATCTTTAAATGGGAAAGGAAAAAGGTGGTGAAATGTCTTGATCAGAGACGGTGTGTGAATAACAGAAGCTTAAAATCTGGTCGCAGGAAGTCTCGATCTTCTTATTCCCCAGACATAGAAGATGATGAGTCTTCTTCACCAGACTTAAATACAATTCAAAATAAAGTGAAGATCAATCTTGAAGAGGATTCACCCAAGCAAGAAGTTCTGCCACCTGAATCTTTAACTGAGTTCCTCAGAGATACTAGTGTAGTTACTGTAGATGCTGTGGATGTGGCAAATGAAAATGCAGCTGGGTTATCAGAATCTTCTAATAAGGTGCTTCCTGGGTTATCTTCTTGTGTTTTGACGAAAGGTGACACTAATGCTGTTGACAAAGATATAATGCAGCAGGAGCTATCTGTTGGGTCTTCCAGTAGAAATCCAGTCTCACCTATACCTGGACTTGATTCTTCATGCTGTAAAGATGCAGATCAACCCAGTCCAGTCTCAGTCCTAGAACCTTCTTTTACTGATGATCTGTCATCTTGTTCTGAATGTTTTGAAAGTCTCAGTGTTGACCTACAAGGGCTTCGAATGCAACTTCAATTGCTGAAGTTGGAATCTGAAGAATACGTAGAAGGATCCATGCTAATTTCAAGTGACGAAGATTGTGGGGAAGCATCTACGGGCATTTTAGAAGACAATGGATTATGTAGAAATGAAGATAACTGGGAGTCTTCCTACATGATTGATGTCTTGTCTGAATCTGGTATTGATAGAGCTCAGCCTGAAGCATTTTTGGAAGTTTGGCATTCTCCAGAATGCCCTGTTAGTCTTTCAGTGTTTGATGAACTTGAAAAGAGGTACTCTGATTGGACTACCTGCACAAGGTCCCAAAGGAGATTGCTTTTTGACCGAATAAATTCTGGAATTGTCAATGTACGTGAGCAATTCATGAGTGCACAGCCATGGGATGCTGGGGAGCCAAGGAAAAGTAAAGGATACTGCTCTGGGGAAGGTGCTGGTGAGCCAATTGCAGTGGTTGAACTTAAGAGATGA 2541 0.416 MQRLKGSKQVRRHRKQKSFPSDSGSCGSGVADEDANSLQLGWRSSKQQLGTPMKKLLAAEMSRETESKRRAPSVIARLMGLDGLPLQLPKQHTSSSENHLKGSTQVGKTRSSGTLYDGRSSRRSSKDQQEFKDVFEVSEIPKAQSSSRYASQGPVDLKISDDEMSFIEQKFMDTKRLATYQDLQSSQDSHDTLEILDSNNDLLQKRHAMHISPKSSKIQFKGREEPDAAPTRIVVLKPNIGKVQNATKFVSSPCSSHTFLSEFGEHAEFSDIRFRDNELNQKKNFPGTASARHSRQNSWESREIAKEITSQMKNSLNNSSMIFSSSRLRGYSWDGSSCSFSGNESPEESEVTTAILENSLDISNTLRPSSHCGESSVSREAKKRLSERWKMSHKSQQGQSICRSNTLAEMLAIPDKEMKAANFDSTSRGKVFHDKVASSGKPAGLTEPVGISSRDGWKDGFIGSLPRSKSLPASSTVFGSPRAILRHEALRDDRFMMPKEIFKWERKKVVKCLDQRRCVNNRSLKSGRRKSRSSYSPDIEDDESSSPDLNTIQNKVKINLEEDSPKQEVLPPESLTEFLRDTSVVTVDAVDVANENAAGLSESSNKVLPGLSSCVLTKGDTNAVDKDIMQQELSVGSSSRNPVSPIPGLDSSCCKDADQPSPVSVLEPSFTDDLSSCSECFESLSVDLQGLRMQLQLLKLESEEYVEGSMLISSDEDCGEASTGILEDNGLCRNEDNWESSYMIDVLSESGIDRAQPEAFLEVWHSPECPVSLSVFDELEKRYSDWTTCTRSQRRLLFDRINSGIVNVREQFMSAQPWDAGEPRKSKGYCSGEGAGEPIAVVELKR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1103g00007 846 MobiDBLite consensus disorder prediction 523 550 - -
Sebi1103g00007 846 MobiDBLite consensus disorder prediction 1 15 - -
Sebi1103g00007 846 Pfam Domain of unknown function (DUF4378) 740 820 IPR025486 -
Sebi1103g00007 846 Pfam DUF761-associated sequence motif 65 85 IPR032795 -
Sebi1103g00007 846 MobiDBLite consensus disorder prediction 88 119 - -
Sebi1103g00007 846 Pfam Protein of unknown function (DUF3741) 168 205 IPR022212 -
Sebi1103g00007 846 PANTHER AFADIN 204 819 - -
Sebi1103g00007 846 MobiDBLite consensus disorder prediction 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1103g00007 Sebi-Chr1103 133465 138216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1103g00007 50 818 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 34.144 5.70e-103 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1103g00007 - - pvu:PHAVU_001G171300g 859.751