Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi1102g00003 | ATGGCAGTAGTCTCTGAGTCCTCTAGCATCTCTGCCACCTCAGCAACCATTTCCCACAAAGTTGATGAAGAAGTCAGCAAAATGGAGAAGGAGAAGGACATCAAATCATCTGAACAAGATCAGGAACTTGATTTTTTCAGTCCAGAGAATAAGGGATCATCATCTTGTTGGGCTAATAGCAGCAAGGAAAATGAAGGGAGAGATGAGAGAACAGAGGAAAAGTCAAACTCAGAGTCAAGGACTTTTTCTTGCAACTTTTGTGACAGAAAATTCTCTTCTTCACAAGCTTTGGGAGGGCATCAAAATGCACACAAACAACAGCGTGCACTAGCAAAGCGTCACAAAGAGATGCAAAACAATGTTGGTGCTTTGGGGCACCCTCATCATTTTTCTTATTACCCTTATCCTAGTCTTTCCACCACACGCCCCTTTCATGGATCATATAATTGGCCACTTGGTGTTAGGATGGAATCCATGATTCACAAGCCATCCTATTCAAATTCCCCACTTGGATTCAGATATGGTGCTATGTGGCCATCAATCCTAAACCCTTCTTCTCATGATAGATTAAGGATTGAGGGTGGTGGGATTCTAGGTGCAAGTTCTACTTCAAGGAGAGAAATAATGATGGTGGGAGAACTATTGGAGCCATTCTCCAATTTGGAGAGTCCTCTGCAAATGCTGCTACAGGGTCAAACTTAG | 702 | 0.4288 | MAVVSESSSISATSATISHKVDEEVSKMEKEKDIKSSEQDQELDFFSPENKGSSSCWANSSKENEGRDERTEEKSNSESRTFSCNFCDRKFSSSQALGGHQNAHKQQRALAKRHKEMQNNVGALGHPHHFSYYPYPSLSTTRPFHGSYNWPLGVRMESMIHKPSYSNSPLGFRYGAMWPSILNPSSHDRLRIEGGGILGASSTSRREIMMVGELLEPFSNLESPLQMLLQGQT | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi1102g00003 | 233 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 82 | 109 | IPR013087 | - | |
Sebi1102g00003 | 233 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Sebi1102g00003 | 233 | MobiDBLite | consensus disorder prediction | 95 | 114 | - | - | |
Sebi1102g00003 | 233 | MobiDBLite | consensus disorder prediction | 62 | 77 | - | - | |
Sebi1102g00003 | 233 | MobiDBLite | consensus disorder prediction | 46 | 61 | - | - | |
Sebi1102g00003 | 233 | MobiDBLite | consensus disorder prediction | 20 | 45 | - | - | |
Sebi1102g00003 | 233 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 4 | 202 | IPR044246 | GO:0009788 | |
Sebi1102g00003 | 233 | Gene3D | Classic Zinc Finger | 59 | 125 | - | - | |
Sebi1102g00003 | 233 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 84 | 104 | IPR013087 | - | |
Sebi1102g00003 | 233 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Sebi1102g00003 | 233 | SUPERFAMILY | beta-beta-alpha zinc fingers | 79 | 109 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi1102g00003 | Sebi-Chr1102 | 84586 | 85373 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi1102g00003 | 75 | 181 | C2H2 Transcription Factor Family | AT5G10970 | 47.706 | 1.05e-22 | 91.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Sebi1102g00003 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi1102g00003 | - | - | gmx:102663393 | 185.267 |