Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1102g00001 ATGAGGAAGAAGCTCGATACCCGTTTCCCTGCTGCTCGGATAAAGAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCAGTTCCTGTTTTAGTGTCTAAAGCTCTGGAATTATTTTTGCAAGATCTTTGTGACCGCACATATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATGCACTGCATTTGAAACATTGTGTGCAAAGCTATAATGTCTTTGACTTTCTGAGAGACATTGTCAGTAGGGTTCCTGACTATGGGCATGGCCATGGCCATGGCCATTCTGAGGCTGGAGCTGATGATCGTGCCCTTCCAAAGAGAAGGAAAGCTGCTGGTGATGATTGCAATGACAGTGATGAAGAGGCTAAGAGGAGTAAGATGCAAGTTGAATCTGAGCCTTGCACCTCTGTTCAGCAAAGTAGCAAAGATGTTCCTATTACAAGTGTGGCAGTGGATAATGGTCCAGAGTCAAAGGAGTTGTCAAAGGAGAGCACAGCAGTTGCTGAGGAAAGTGCTCAATCTCTCCGTAACATTGATCTGAATGCCAACTTAAATGAAAACGAGGACAAAAATGCTAGCACAGCAGCTCAGGCCTCATTGCCTGAACCTGCCACAACAGAGATTAAGCATGAAGAAATTCCAGGTTGGTCCCTTTCTGATGTGGACAAGATGGCCATTGACACCATGCAGCTAGCAAACCTTGGTAGTCGACTAGAAGAGGATGAGGAAGATTATGATGAGGAAGG 758 0.4485 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSRVPDYGHGHGHGHSEAGADDRALPKRRKAAGDDCNDSDEEAKRSKMQVESEPCTSVQQSSKDVPITSVAVDNGPESKELSKESTAVAEESAQSLRNIDLNANLNENEDKNASTAAQASLPEPATTEIKHEEIPGWSLSDVDKMAIDTMQLANLGSRLEEDEEDYDEEG 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1102g00001 253 MobiDBLite consensus disorder prediction 91 171 - -
Sebi1102g00001 253 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Sebi1102g00001 253 MobiDBLite consensus disorder prediction 193 217 - -
Sebi1102g00001 253 MobiDBLite consensus disorder prediction 91 132 - -
Sebi1102g00001 253 MobiDBLite consensus disorder prediction 133 151 - -
Sebi1102g00001 253 FunFam dr1-associated corepressor homolog 1 86 - -
Sebi1102g00001 253 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Sebi1102g00001 253 SUPERFAMILY Histone-fold 4 90 IPR009072 GO:0046982
Sebi1102g00001 253 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1102g00001 Sebi-Chr1102 11409 17346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1102g00001 1 242 CCAAT-HAP5 Transcription Factor Family AT3G12480 48.264 9.30e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Sebi1102g00001 CBFD_NFYB_HMF 1e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1102g00001 K21752 - gmx:100810093 398.282