Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi10g00084 ATGGCTGTCCAATCGAGCTTGTGCAGCCTGAGATTCTCCGCTTCAAGGCCTTTGAGCCCATCCTCCTCCTCGGCAGGCACCGCTTCGCCGGCGTCGACATGCGCATCCGCGTCAAGGGCGGTGGTCACACCCTCACAGATCTACGCCATCCGTCAGAGCATCGCTAAGGCTCTCGTTGCCTACTACCAGAAGTACGTCGACGAACAGAGCAAGAAGGAGATCAAGGACATCCTTGTTCGCTATGACCGCACCCTCCTCGTTGCTGATCCCAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGCGGCGCTCGTGCTAGAAATTCATTCTCTAAACATTCAAGAGTTTCAAGAAACAGTGTAAACCGTGAGAAATCCTACCCACCTTCCAACCATTTACCTGATAATCCCAACGCTCAACAGCTGTTTATGGTCTTAGCTCTCCTATCACCTTCGCAGCTGTTGATGGACTTGGCTCTAGAGGAGATCCTCTGA 492 0.5386 MAVQSSLCSLRFSASRPLSPSSSSAGTASPASTCASASRAVVTPSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARNSFSKHSRVSRNSVNREKSYPPSNHLPDNPNAQQLFMVLALLSPSQLLMDLALEEIL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi10g00084 163 MobiDBLite consensus disorder prediction 96 133 - -
Sebi10g00084 163 MobiDBLite consensus disorder prediction 112 133 - -
Sebi10g00084 163 SUPERFAMILY Ribosomal protein S5 domain 2-like 45 111 IPR020568 -
Sebi10g00084 163 Pfam Ribosomal protein S9/S16 45 111 IPR000754 GO:0003735|GO:0005840|GO:0006412
Sebi10g00084 163 Gene3D - 40 112 IPR014721 -
Sebi10g00084 163 PANTHER RIBOSOMAL PROTEIN S9 44 112 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi10g00084 Sebi-Chr10 3020216 3021261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi10g00084 45 106 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 96.774 4.19e-39 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi10g00084 K02960 - rcu:8288339 125.176