Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi10g00068 ATGGAAAATAATGTGCAACACTGTAATGATATGGGAACTACAGAAGATAGTTTCGATGATGATGCTTACACTTCAATGAATGATGTGGAACCGCCTATTGATTTTGCTGTAAATAGCGAAGCTGATTTTGCCAATTTTGACCCTGCAATGTTAAATGAGGAGAGTCTGTTGAAGTTTCATTTTGTTGATCTTGAAGTCGCATATGAATTCTATAATTGGTATGCCAACATTAAGGGTTTTTCAGTGCGCAAAAGCAAGGTGCGAAAACAGAAAAATGATGAGATTGTGGAGAAGAATTTTCTTTGTCACAGGGAAGGTGGGTATGAACATGTAGGTTTTCGAAAAAGAGACACGTACAATGAGATAGGCAGACAAAGGCTTTTGCAATGTTCGGATGCCAAGGGTGTGGTCAAATACTTACGTGATTCAAATGATCCTGCCATGTTTTGGAGGCATACTGTTGATGGGGATGGGAGATTGCAACGTTTGTTTTGGTGTGACGGACGTAGCCAAGTTGATTACAATTTGTTTGGTGAAGTGGTAGCCTTTGATGCAACATACCGGAAGAATAAATATCATTTTCCTTTGGTTGTATTTTCCGAGGAAACATACGTGTGGATCCTTGAGCAGTTGTTGGTGGCAATGAAAGGACTCAGTACCACTTCTCGTTGTGAGGGTTTACATGCACAGTTGGCTAGATTTGTGCATTCTCGTCATGATTTGGTTGGTTTCCTTCAGAATTTTGACCGGTGTCTGGAATCACTTAGATGTAATGAGATAGAAGCAGACTTTGCAACTGTTGTTGGTGAACAGGTTTTGCAGACAAACTTGCATCGATTGGAAAGGTCAGCATCGAGGATCTTTACTAGAGAGGTCTTTTTGTTAGTTCATCCTGCAATTGCACGGGGTAGTACGATGCGGGTCACAGGATGTACACAGACAATGTCACAGACAATCTACACAGTTTCCAAGTATGCAAGGCCAAACAATAGATGGCATATCTCATACAATGAGAATCCGTTGTGCTTCAAATGTTCTTGTCAAAGAATGGAATGTTGGGTTCTTCCATGTGATCACTTAATTGGTCTGTTGGTTCACCTTGACATAGAAGAGATTCCCAAATATCTAATTAATGATAAAAGAAATTGCATATGGGAATCTGTATTTTTGGCCCGTTGTGGTGCGTTGGATTTTTTATGCAGGAAGATGAACAAATTGGCTGGCAAGTCAAGTGCAAGGTTTCAACGCATTCGAGACATTATTAAACATGAGACAGACCTTATGATTGCTGAAGATGAAGCTGAAAAGGAGGTACCTTGTAGAAACGATGAGATGCCAAGTGACAATTTGAGAGACCCAGTTAGAGTGGGCGCTAAGGGTTGTGCTGCTAGTTCCTCATCACAAGTGACAAAGCGTCGGCAGAAAATGTAG 1431 0.4081 MENNVQHCNDMGTTEDSFDDDAYTSMNDVEPPIDFAVNSEADFANFDPAMLNEESLLKFHFVDLEVAYEFYNWYANIKGFSVRKSKVRKQKNDEIVEKNFLCHREGGYEHVGFRKRDTYNEIGRQRLLQCSDAKGVVKYLRDSNDPAMFWRHTVDGDGRLQRLFWCDGRSQVDYNLFGEVVAFDATYRKNKYHFPLVVFSEETYVWILEQLLVAMKGLSTTSRCEGLHAQLARFVHSRHDLVGFLQNFDRCLESLRCNEIEADFATVVGEQVLQTNLHRLERSASRIFTREVFLLVHPAIARGSTMRVTGCTQTMSQTIYTVSKYARPNNRWHISYNENPLCFKCSCQRMECWVLPCDHLIGLLVHLDIEEIPKYLINDKRNCIWESVFLARCGALDFLCRKMNKLAGKSSARFQRIRDIIKHETDLMIAEDEAEKEVPCRNDEMPSDNLRDPVRVGAKGCAASSSSQVTKRRQKM 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi10g00068 476 MobiDBLite consensus disorder prediction 461 476 - -
Sebi10g00068 476 Pfam FAR1 DNA-binding domain 69 110 IPR004330 -
Sebi10g00068 476 ProSiteProfiles Zinc finger SWIM-type profile. 330 368 IPR007527 GO:0008270
Sebi10g00068 476 PANTHER OS01G0519700 PROTEIN 106 217 - -
Sebi10g00068 476 MobiDBLite consensus disorder prediction 438 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi10g00068 Sebi-Chr10 2476032 2478129 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi10g00068 FAR1 1.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi10g00068 - - vvo:131661205 221.476