Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi10g00064 ATGCTCAAGATTTCATGTGCTAAGTCCAAAGCAAACACAGGCTCAACTTCAGACAGGGGAAAGAAACCCCTTGCTGATTATGAGACCCTGTCTGAAGGGGTTCAATACCCTTATATGGGAGGTGACATGACCCCAAGAAGGACTGAACCAGTAGCAGCTGCCCAAGATGGGTTGGGGGAAGAGGATGAAGCTATAGAATGGGTGGCTCAGGTGGAGTCAGGAGTCCAAATAACATTTGAGACCATTCCTACTGGGGGAGATGTTCTCAAGAGAATTCGCTTCAACCGAGAGATGTTTGACAGGCACCAAGCTCAAGCATGGTGGGGTGAGAATTATGACAGGATCATGGAACTTTACAATGTCCAGAGTTTCAACCAAAATGCTATCAGCACATCTCAGAGGTTTGAGGATGAGGATCAGCCTGGAGTGTTGATCACAATCAGGGTGCTGCCTGATGGAACAAAACAGATTCACCGTGTCAGCGGCCAGATATTTGACGAGGAAGGTGCCAAGCAATGGTGGGAGGAGAACAGGGAAAGGATTAAAGAAGATTACCTGTGA 561 0.4759 MLKISCAKSKANTGSTSDRGKKPLADYETLSEGVQYPYMGGDMTPRRTEPVAAAQDGLGEEDEAIEWVAQVESGVQITFETIPTGGDVLKRIRFNREMFDRHQAQAWWGENYDRIMELYNVQSFNQNAISTSQRFEDEDQPGVLITIRVLPDGTKQIHRVSGQIFDEEGAKQWWEENRERIKEDYL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi10g00064 186 ProSiteProfiles BRX domain profile. 65 120 IPR013591 -
Sebi10g00064 186 Pfam Transcription factor regulating root and shoot growth via Pin3 138 185 IPR013591 -
Sebi10g00064 186 Pfam Transcription factor regulating root and shoot growth via Pin3 66 119 IPR013591 -
Sebi10g00064 186 ProSiteProfiles BRX domain profile. 133 186 IPR013591 -
Sebi10g00064 186 PANTHER PROTEIN BREVIS RADIX-LIKE 1 138 186 IPR044532 -
Sebi10g00064 186 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi10g00064 Sebi-Chr10 2395618 2396932 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi10g00064 127 186 Major Intrinsic Protein MIP AT1G31880 51.613 1.34e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi10g00064 - - hsyr:120193584 161.384