Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi10g00059 ATGTTCTCAAGAGAATTCGCTTCAAGAGCTAAGACTAACAATTCTTTGCATTTAAATTTGAAGCCGAGAGATGTTCGACAGGCACCAAGCTCAAGCATGGTAGGTGAGAATTATGATAGGATCATGGAACTTTACAATGTCCAGAGTTTCAACCAAAATGCTATCAGCACATCTCAGAGGTTTGAGGATGAGCAAAGGGGTAGTAGCCCTTTGGCTGAATGGTTAAATTCAACAGCAAGGACTCACTACTACCAAAGCACAGCCTCAGGAATCACTTTGGACAACATCGGTGGTGGTGAAAACTTGAATAAAGGAGGGCCATCCAATGAAGCTGCAAGAATATCCAACTCTTCTATACAGGAGACTGAATTCAATAATGGTATTGACAATGACTCAGAATGGATTGAGCAGGATCGGCCTGGAGTGTTGATCACAATCAGGGTGCTGCCTGATGGAACAAAACAGATTCACCTTGTCAGCGGCCAGATATTTGACGAGGAAGGTGCCAAGCAATGGTGGGAGGAGAACAGGGAGAGGATTAAAGAAGATTACCTGTGA 558 0.4373 MFSREFASRAKTNNSLHLNLKPRDVRQAPSSSMVGENYDRIMELYNVQSFNQNAISTSQRFEDEQRGSSPLAEWLNSTARTHYYQSTASGITLDNIGGGENLNKGGPSNEAARISNSSIQETEFNNGIDNDSEWIEQDRPGVLITIRVLPDGTKQIHLVSGQIFDEEGAKQWWEENRERIKEDYL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi10g00059 185 PANTHER PROTEIN BREVIS RADIX-LIKE 1 35 185 IPR044532 -
Sebi10g00059 185 Pfam Transcription factor regulating root and shoot growth via Pin3 132 184 IPR013591 -
Sebi10g00059 185 MobiDBLite consensus disorder prediction 1 20 - -
Sebi10g00059 185 ProSiteProfiles BRX domain profile. 132 185 IPR013591 -
Sebi10g00059 185 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi10g00059 Sebi-Chr10 2340155 2341188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi10g00059 35 185 Major Intrinsic Protein MIP AT1G31880 40.244 1.82e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi10g00059 - - gmx:100785003 139.043