Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi10g00058 ATGGGAGGTGACATGACCCCAGGATGGACTGAACCAATAGCAGCTGCCCAAGATGGGTTGGGGGAAGAGGATGAAGCTATAGAATGGGTGGCTCAGGTGGAGTCAGGAGTCCAAATCACATTTAAGACCATTCCTACTGGGGGATATGTTCTCAAGAGAATTCGCTTTAACCGAGAGATGTTTGACAGGCAGCAAGCTCAAGCATGGTGGGGTGATAATTGTGATAGGATCATGGAACTTTACAATGTCCATAGTTTCAACCAAAATGCTATCAGCACTTCTCAGAGGTTTGAGGATGAGCAAAGGGGTAGTAGCCCTGTGGCTGCATGGTTAAATTCAACAGCAAGGACTCACTACTACCAAAGCTCAGCCTCAAGAATCAATTTGGACAGCATCAGTGGTGGTGAAAACTTGAATGAAGGAGGGCCATCCAATGAAGCTGCAAGAATATCCAACTCTTCTATACGGGAGACTGAATTCAATAATGGCACTGATAATGACTCAGAATGGGTTGAGCAGGATCAGCCTGGAGTGTTGATCACAATCAGGGTGCTGCCTGATGGAACAAAAGAGATTCACCGTGTCAGCGGCCAAATATTTGATGAGGAAGGTGCCAATCAATGGTGGGAGGAGAACAGGGAGATGATTAAAGCAGATTACCTGTGA 666 0.4625 MGGDMTPGWTEPIAAAQDGLGEEDEAIEWVAQVESGVQITFKTIPTGGYVLKRIRFNREMFDRQQAQAWWGDNCDRIMELYNVHSFNQNAISTSQRFEDEQRGSSPVAAWLNSTARTHYYQSSASRINLDSISGGENLNEGGPSNEAARISNSSIRETEFNNGTDNDSEWVEQDQPGVLITIRVLPDGTKEIHRVSGQIFDEEGANQWWEENREMIKADYL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi10g00058 221 Pfam Transcription factor regulating root and shoot growth via Pin3 28 81 IPR013591 -
Sebi10g00058 221 Pfam Transcription factor regulating root and shoot growth via Pin3 168 220 IPR013591 -
Sebi10g00058 221 ProSiteProfiles BRX domain profile. 27 82 IPR013591 -
Sebi10g00058 221 PANTHER PROTEIN BREVIS RADIX-LIKE 1 19 221 IPR044532 -
Sebi10g00058 221 ProSiteProfiles BRX domain profile. 168 221 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi10g00058 Sebi-Chr10 2318060 2319242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi10g00058 14 221 Major Intrinsic Protein MIP AT1G31880 42.478 3.68e-50 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi10g00058 - - gmx:100785003 205.682