Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi109g00045 ATGGATGGACACATGCCCGGCATGGATGGGATGGGCATGGCACCACCAAAGCCATCTACTAATGGCACCATGATGATGGGCCATAAAATGCACGGCATGATGCACATGACCTTCTTCTGGGGGAAGGATGCCTTGATTCTGTTCGACAATTGGCCTGCGGGTAAAGGTAACATGTATGCTTTGGCCTTGGTCTTTGTGTTTGTGATGTCTGTTCTCATCGAGCTGCTCTCTCACTCCCGGTTCATCAAACCTGGTTCGAACCATGTCACGGCCGGTCTGGTTCAGACCCTGTTGCATCTCCTTAGGGTTGGGCTTTCTTACTTGGTCATGCTGGCACTCATGTCTTTCAATGGGGGAGTTTTCTTGGTTGCTGTGTTCGGTCATGCGCTTGGGTTCTTCTTTTGTAGCAGGGCTTTCAATAAACCGCACAAGGATGAGGGTTTTGATCTTCCTCCAATGTCTTGTTAA 468 0.4957 MDGHMPGMDGMGMAPPKPSTNGTMMMGHKMHGMMHMTFFWGKDALILFDNWPAGKGNMYALALVFVFVMSVLIELLSHSRFIKPGSNHVTAGLVQTLLHLLRVGLSYLVMLALMSFNGGVFLVAVFGHALGFFFCSRAFNKPHKDEGFDLPPMSC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi109g00045 155 Pfam Ctr copper transporter family 84 135 IPR007274 GO:0005375|GO:0016020|GO:0035434
Sebi109g00045 155 Pfam Ctr copper transporter family 36 80 IPR007274 GO:0005375|GO:0016020|GO:0035434
Sebi109g00045 155 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 25 144 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi109g00045 Sebi-Chr109 893106 893573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi109g00045 37 155 Inorganic Solute Cotransporters AT5G59030 50.000 1.72e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi109g00045 K14686 - gmx:100306175 227.639