Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi109g00044 ATGGAAGGAATGGCACCATCGCCGTCTTCTAATGGCGCCATGACGACGGTTCATAAGAAGATGACGCACATGACCTTCTTCTGGGGAAAGGAAGCAGAGATTCTGTTCGAGAATTGGCCTGGGGACAATGGTAACATGTACGCCTTGGCCTTGATCTTTGTGTTCGTTTTGACTGTTGTCGTCGAATTGCTCTCCCGCACCCGGTTCATCAAACCCGGAACGAACCATGTGTTTGCTGGTTTGATTCAGACCCTGTTGCACCTCCTCAGGGTTGGGCTGTCTTACTTAGCCATGCTTGCTGTCATGTCTTTCAATGGAGGAGTGCTCTTGGTTGCTGTGTTCGGTCATGCTCTTGGCTTCTTCTTAAGTAGCAGGGTCTTTCAAAAACCGCACTACGATGAGGGTTATGATCTTCCTCCAATGTCTTGTTGTTAA 435 0.4874 MEGMAPSPSSNGAMTTVHKKMTHMTFFWGKEAEILFENWPGDNGNMYALALIFVFVLTVVVELLSRTRFIKPGTNHVFAGLIQTLLHLLRVGLSYLAMLAVMSFNGGVLLVAVFGHALGFFLSSRVFQKPHYDEGYDLPPMSCC 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi109g00044 144 Pfam Ctr copper transporter family 75 122 IPR007274 GO:0005375|GO:0016020|GO:0035434
Sebi109g00044 144 Pfam Ctr copper transporter family 24 66 IPR007274 GO:0005375|GO:0016020|GO:0035434
Sebi109g00044 144 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 16 129 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi109g00044 Sebi-Chr109 873802 874236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi109g00044 25 144 Inorganic Solute Cotransporters AT5G59030 50.806 3.35e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi109g00044 K14686 - gmx:100306175 196.823