Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi109g00041 ATGCAGGAGAGTTCATACCCTTCAAATTCAGGCTTTTACAAGTTTGGATGGTCTGAACCTGAGAGTAATTCATACTATCGTTACAATCATGGTTATGATGTAAATCATCAGGAACCACTGGTGGATGAATATAGGAGGCCTTCAGAAAATTCATCGACAATCAATGAACAGACAGAAGCTGTAAGCACAGAGTGGGGGAAGGTGGAAACACTGACACACGAGACAGTTCTATTGAATGACTCTTTAAATAGTCCCAAAGAGAAAAGTCCACGAAGACATCATAGTAATTCCAATGATTATCAGGTCATTTGGCAAGACAATATTGATCCTGACAACATGACCTATGAGGAACTACTTGAATTAGGTGAGGCTGTTGGAACTCAAAGCCGTGGTCTCACCCAAGAACAGATCTCCTTGCTTCCAGTGTCAAAGTACAAGTGTGGGTTCTTCTTGAGGAAGAAGTCAAGGGATGAGAGGTAA 480 0.4146 MQESSYPSNSGFYKFGWSEPESNSYYRYNHGYDVNHQEPLVDEYRRPSENSSTINEQTEAVSTEWGKVETLTHETVLLNDSLNSPKEKSPRRHHSNSNDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISLLPVSKYKCGFFLRKKSRDER 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi109g00041 159 MobiDBLite consensus disorder prediction 77 102 - -
Sebi109g00041 159 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 159 IPR033276 GO:0004842|GO:0016567|GO:0046621
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi109g00041 Sebi-Chr109 794707 796703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi109g00041 9 159 C3H Transcription Factor Family AT3G63530 39.744 2.99e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi109g00041 K19045 - gmx:100793907 253.447