Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1099g00008 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACGCTGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGTTCATCCGGCGGTGCCTACGTCAAGGGCGGCGGCGCGGCCGTGCCTTCACCGTCACTCTCCTCTAGTCGGAGTTTTAACAAGAAGTCTAATAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTCCCCTGGTGAATTCAGCTGAGTCTAATAGTGCTCATGCAGTCCGGACCATACCAAATGGTTCCCATGTACAGCCGCACCATCATGGAGGATCTGATGCACCAGTTACAAATGCAGCTGTCAAGTCATCTGAATCATCAGCTGCACAGAGGAGCCCCAGAGTTGTTCCAAAAGCTCCTACTTCTCAACCTCCCGCCGTGAATTCTGAGCCAGCAGCTCCTACCACCCCTGCTAAGGGAGATGCATCTAAGGCATTCCCTTTTCAATTCGGATCTATTAGTCCCGGCTTTATGAATGTGATGGCAATTCCTGCTCGCACAAGCTCCGCTCCTCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCGTCATGATTCTTTTAGACCTGTGCCTTCAGTGCCAGCACCTCCTGTTCCAAAGCATCAGCCAGCGAAGAAGGATACAGATCTATCTAGCGCTGGTGAAACTTATATAGGGACTAGGACAAAAAAGGATACTCAAGTTTCACCTTTACCCCCAGCAAGCCAGATGCAGAAGCCTTCTGTTATTCCTATAACTGGAATTTCTATGGCTATGCCATTTCACCAGTCACAGGCATCTGTACACTTTGGTGGTCCCAATCCACAGATTCAATCTCAGGGTATGTCAACAGCATCTCTTCAGATGCCTTTACCAATGCCTTTACCAATTGGAAGTGCTGCACAAGTACAGCAACAGGTTTTTGTTCCAAGTCTTCAACCTCATCCAATCCATCCTCAAGGAATTATGCATCAAGGCCAAAGCATTGGTTTCACTCCTCAAATGGGTCCTCAATTGCCCCATCAGTTAGGCAACATGGGTATTGGCATCAGCCCACAATATACCCCACAGCAAGGAGGAAAATTTGCTGGCCCTCGTAAAACTACTCCTGTCAAAATAACTCATCCTGAGACACATGAAGAGCTTAGGCTTGATAAAAGGGCTGATACATATTCAGATGGTGGATCATCTGGTGCTCGGTCTCATTCTGGCATGCCTTCTCAATCTCAGCCTGTCCAGCCATTTGCAGCTTCTCATCCTATTAATTACTATCCACCCAGTTCCTACAGTACAAGTTCTCTCTTTTATCCACCTCCTAGCTCTCTTCCATTATCAAGTAGCCAGATAACTACTAACTCTCAGCCTCCAAGAATTAATTATGCAGGGAGCCATGGTCTGCAAAATGTTGGTTTTATGAACACACAATCTCATACTCATAGTTCCCTGCCTGTTAATAAAGCTGGTACTCTTGTTCCTAGCAATGTTGAACCACCTAATCCAGAATTTTCCCGTGATGTGCAAAATGCAATCTCATTACCTCCATCAGGAGTAAATTCTGTGTCTATTAAGCCAAGTGGTGTGTCTGTTGTTGTGGACTCGAGCATTTCTGGTGCTCAAAAGAGTGGATCTCCTAGTTCTTCAGTAACATCTGGTGATGTTAGCTCTTCTGTGCCACCAAAAGGGTCTGAAACCTGTTCTGAAATTTCTTCACAACAATCTATTGCTGCATCTGCTGTCACTGAGGATTCTGTTTCAGTTGTGTCTAATAATGAAGGAAGAAAGAAAGAATCACTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGAAACTACCAAAGAAAGGCCAATCTCAGCAACAGGTTACTGTACAATCTGCTGCTGTGGCTGAAGAACCTTCCCAAGTTGTTGATGGTGGTATCTCTGATAGAGGAGCTTCTGAAACCATAGGAACTAGAACAAACCATTCTGAAGCAATAGCCAGTAAAGATCTCTCAGCAGCAGCTTCAGATACATCAACTGCCAGTGAGGGCATACCTTATGCTGTTGAAGTGAAGACAAATGATTCTAGTGAGATTTCTGCTTGTGCTTCAGCTGAAGGACCTGTTACTCAAGCCGTGGATAGTTTGAACAATCATAAGAATGATGAACTGGATGGATTATCACAACAGGATAAACTGTTAAAGCAGAACATTTTGGATATAGGTGGTAAAAATGAAAATTCATCTCTTCAGAAATGTGAAAATATCACCCATGGTGAAATGGAATTTAAACAACCTAAACAAGGTGCTGCAAAGTTAAGCACTGAGGTTGTAACCTTGAGGACTGGACGGGAAGGGCAGGATGAATCTACAAGTTGTCTTGCAGAATGTGACAGGATGACGGATAATTTAGGCTTGTCTACCTCTACTGCATTGGATTCTAAAGATGTTTCTTTGAACAAAAATGATAGTGTTGTTGCTAACGAAGCTATTGCTACAAATTCTGGCATATCAGATCAGCAATCTGCTGATCTTCTAGAAACAACTTCAAAAAATTGCAAGGATAGTTCAGAGAATGCTGACAGTGATTTACTGTCTCTTCCAGCAGCATCAGGTACCAAGGACAGACCAATTTTAGAGCCAAGTAAGGTGAAAACTACAACAAAGGGGAAAAAGAAAAGAAAAGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCGACATCTGATCTTTATAATGCATATAAGGGACCTGAGGAAAAGAAAGAAGCTGTTGTAAGTTCAGAGAAAACTGAAAGTGTTTCCACTTCCGGAAATTTGGAGCAGTTGCCTACGGATGCCGCTCAGCCAGATGATATTGCAAGTGAACAGAGTAAAGCTGAACTTGATGACTGGGAGGATGCTGCTGACATGTCTACACCAAAACTAGAAGTTCCAGATAAAAATGAACATGTTACTGATGGGAGTGCAGTTACTGCCAAAAAGTACTCTCGAGATTTCCTTTTGATGTTTGCAGACCAATGCACTGATCTTCCAGAAGGGTTTGAAATCAAAAAAGACATAGCTGAGGCTTTGATGAGTGCTAATATCAGTTCTCATGTTTCTGAACGAGATTCACATCCTTCTCCTGGAAGGGTTATAGATAGGTCAGGTCGGATGGATCGTCATGGGAGTGGTGTTATTGAGGAAGACAAATGGAGTAAAGTTTCTGGTGCTTTTCATTCTGGTATGCGTTTGGATGGTATTGGAGGTAATGCAGGATTTCGACCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGCACACAAACCCCTCTGCAATATGCTGGAGGGATTCTTTCTGGGCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAACAGCCCTGATAGTGAAAGGTGGCAGCGTGCTGCTAGCTTCCAGCAGCGGGGTTTAATTCCTTCTCCATCTCCCCAATCTCCTTTACAGATGATGCACAAAGCTGAGAAAAAGTATGAGGTGGGTAAAGTGACAGATGAGGAAGAGGCGAAGCAGAGGCAGCTGAAAGTCACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGTGCACATCTGGCAGCTGCGTTGCCTGATCTCAGTCAAGATAATGAAAAGATAACTTTTAAGAGATTATTATTGAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAACAAGGCTGATGAAGGTGAGGTGAAACAGTCTGTTGAGGAAAGAGAAGAGAAACGAACCAAGGCTAGAAGGCGCATGTTGGGTAATATCAGATTGATTGGAGAACTATATAAAAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTTGGTCAGTATCAGGATCCTGATGAAGAGGATATTGAAGCCTTGTGCAAGCTGATGAGTACTATTGGAGAGATGATTGACCATCCTAAAGCCAAGGAACATATGGATGCATACTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTTAGGTTCATGTTGAAGGATGTCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGAAAAGTTGAAGGTCCAAAGAAAATTGAAGAGGTGCACAGAGATGCTTCCCAAGAGAGGCAGGCCCAAGCTAGTAGGCTGGGTCGTGGTCCAGGCAACAATGCAGCAAGGAGGATGCCTATGGAATTTGGTCCGAGAGGGTCATCTATGTTATCTCCTAATGCTCAGATGGGTGGAGTGCGTGGGTTGCCTACCCACGTTCGTGGGTTTGGTTCTCAGGATGTTCGTATGGATGAAAGGCAATCTTATGAGGCTAGGACATTGTCAGTTCCCTTGCCTCAAAGACCTTTAGGTGATGATTCAATAACATTGGGACCCCAGGGTGGTCTTGCTAGAGGAATGTCCATTAGAGGTCCACCTGCGGTTTCAAGTTCGACTGGTCTTAATGGTTATAGCAATTTAGTGGAGCGTGCTCCCTACAGTTCGAGGGAAGACCTCACACCAAGATATGTTCCAGATAAATTTTCTGGTCCAACTGCTTATGATCAATCCAGTTTTCAAGACCGCAATATGAATTATGGTCACAGGGACTTGAGAAATGCAGATAGAATTCCTGATAGAGCTGTTATAACCTCACCTCCTGCTCGAGTGCAAGGAACAGCAGGCTCCCAGAGCACTTCTTCAGAGATGGGTTGGTCAGAGGAGAGACTGCAGGACATGTCCATGGCAGCAATCAGAGAATACTATAGTGCTAGAGATGTGAATGAAGTTGTTTTATGTGTCAAAGATCTGAACTCACCAAGCTTTCATCCTTCCATGGTTTCTCTCTGGGTCACGGACTCATTCGAGAGAAAGGACACAGAGAGAGATCTTTTGGCCCAACTGCTAGTCAACCTTGTGAAATCTAATGATGGCACCTTAAATCAAGCCCAGCTCATCCAAGGGTTTGAATCTGTTCTCAGTACTTTGGAAGATGCGGTTAATGATGCCCCGAAAGCACCAGAGTTTCTTGGCCGCATTTTTGCCAAGACTATAACAGAGCATGTAGTCTCTTTGAAAGAGATCGGGCAGTTAATTTGTGATGGTGGGGAGGAACCAGGCAGTCTTTTAAACATTGGACTTGCAGCTGATGTTATTGGAAGCACCTTAGAAGTAATAAAAATTGAGAAGGGTGATGCTGTCTTGAATGAGATCCGGACAAGCTCCAACTTGCGGTTGGAGACCTTCCGGCCACCAGAACCGCTTACATCACGGAAGTTAGAGAAATTCATTTAG 5346 0.4401 MSFNQSKSDKSDAVYRKSGRSASFNQQRGSSGGAYVKGGGAAVPSPSLSSSRSFNKKSNNNAQGGQSRVNPPLVNSAESNSAHAVRTIPNGSHVQPHHHGGSDAPVTNAAVKSSESSAAQRSPRVVPKAPTSQPPAVNSEPAAPTTPAKGDASKAFPFQFGSISPGFMNVMAIPARTSSAPPNIDEQKRDQARHDSFRPVPSVPAPPVPKHQPAKKDTDLSSAGETYIGTRTKKDTQVSPLPPASQMQKPSVIPITGISMAMPFHQSQASVHFGGPNPQIQSQGMSTASLQMPLPMPLPIGSAAQVQQQVFVPSLQPHPIHPQGIMHQGQSIGFTPQMGPQLPHQLGNMGIGISPQYTPQQGGKFAGPRKTTPVKITHPETHEELRLDKRADTYSDGGSSGARSHSGMPSQSQPVQPFAASHPINYYPPSSYSTSSLFYPPPSSLPLSSSQITTNSQPPRINYAGSHGLQNVGFMNTQSHTHSSLPVNKAGTLVPSNVEPPNPEFSRDVQNAISLPPSGVNSVSIKPSGVSVVVDSSISGAQKSGSPSSSVTSGDVSSSVPPKGSETCSEISSQQSIAASAVTEDSVSVVSNNEGRKKESLSRSNSLKDNQKKLPKKGQSQQQVTVQSAAVAEEPSQVVDGGISDRGASETIGTRTNHSEAIASKDLSAAASDTSTASEGIPYAVEVKTNDSSEISACASAEGPVTQAVDSLNNHKNDELDGLSQQDKLLKQNILDIGGKNENSSLQKCENITHGEMEFKQPKQGAAKLSTEVVTLRTGREGQDESTSCLAECDRMTDNLGLSTSTALDSKDVSLNKNDSVVANEAIATNSGISDQQSADLLETTSKNCKDSSENADSDLLSLPAASGTKDRPILEPSKVKTTTKGKKKRKEILQKADAAGSTSDLYNAYKGPEEKKEAVVSSEKTESVSTSGNLEQLPTDAAQPDDIASEQSKAELDDWEDAADMSTPKLEVPDKNEHVTDGSAVTAKKYSRDFLLMFADQCTDLPEGFEIKKDIAEALMSANISSHVSERDSHPSPGRVIDRSGRMDRHGSGVIEEDKWSKVSGAFHSGMRLDGIGGNAGFRPGQGGNFGVLRNPRTQTPLQYAGGILSGPMQSMVNQGGMQRNSPDSERWQRAASFQQRGLIPSPSPQSPLQMMHKAEKKYEVGKVTDEEEAKQRQLKVTLTGVISQIFEKALMEPTFCEMYANFCAHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSVEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERQAQASRLGRGPGNNAARRMPMEFGPRGSSMLSPNAQMGGVRGLPTHVRGFGSQDVRMDERQSYEARTLSVPLPQRPLGDDSITLGPQGGLARGMSIRGPPAVSSSTGLNGYSNLVERAPYSSREDLTPRYVPDKFSGPTAYDQSSFQDRNMNYGHRDLRNADRIPDRAVITSPPARVQGTAGSQSTSSEMGWSEERLQDMSMAAIREYYSARDVNEVVLCVKDLNSPSFHPSMVSLWVTDSFERKDTERDLLAQLLVNLVKSNDGTLNQAQLIQGFESVLSTLEDAVNDAPKAPEFLGRIFAKTITEHVVSLKEIGQLICDGGEEPGSLLNIGLAADVIGSTLEVIKIEKGDAVLNEIRTSSNLRLETFRPPEPLTSRKLEKFI 1781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1099g00008 1781 FunFam Eukaryotic translation initiation factor 4G 1162 1386 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 1378 1415 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 177 249 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 924 939 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 1242 1270 - -
Sebi1099g00008 1781 Gene3D - 1160 1386 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 448 467 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 848 958 - -
Sebi1099g00008 1781 Coils Coil 1233 1253 - -
Sebi1099g00008 1781 SMART if4_15 1161 1373 IPR003890 GO:0003723|GO:0005515
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 649 677 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 474 491 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 107 121 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 1378 1397 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 223 249 - -
Sebi1099g00008 1781 SMART ma3_7 1594 1708 IPR003891 -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 539 677 - -
Sebi1099g00008 1781 FunFam Eukaryotic translation initiation factor 4G 1587 1780 - -
Sebi1099g00008 1781 Pfam MIF4G domain 1179 1373 IPR003890 GO:0003723|GO:0005515
Sebi1099g00008 1781 SUPERFAMILY ARM repeat 1588 1778 IPR016024 -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 616 632 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 596 615 - -
Sebi1099g00008 1781 Gene3D - 1586 1781 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 1 160 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 18 32 - -
Sebi1099g00008 1781 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 783 1781 IPR045208 GO:0003743
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 397 419 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 1027 1052 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 375 393 - -
Sebi1099g00008 1781 ProSiteProfiles MI domain profile. 1593 1717 IPR003891 -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 1033 1052 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 1522 1545 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 848 862 - -
Sebi1099g00008 1781 Pfam MA3 domain 1600 1706 IPR003891 -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 474 513 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 539 595 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 44 88 - -
Sebi1099g00008 1781 MobiDBLite consensus disorder prediction 360 422 - -
Sebi1099g00008 1781 SUPERFAMILY ARM repeat 1176 1375 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1099g00008 Sebi-Chr1099 48201 57058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1099g00008 1 1780 Eukaryotic Initiation Factors Gene Family AT3G60240 43.565 0.0 1208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1099g00008 K03260 - gmx:100796636 2629.74