Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1095g00004 TTTATTGGCGATGCTGTTATAAATTTATTATGGAGCCATCTTTTGACTGTTTATTGTTTTGGAATCCCAGGAATCACTTTAGCTGAGTATTTTAGAGACATGGGTTACAATGTCAGCATGATGGCAGATTCAACATCTAGATGGGCAGAAGCATTGCGTGAAATCTCTGGACGGCTGTGGATATCCTCATACCTTGCTGCACGTTTAGCCTCTTTCTATGAACGTGCTGGGAAAGTAAAATGTCTTGGAGGTCCTGAACGTACTGGTAGTGTCACAATTGTTGGTGCTGTTTCTCCACCTGGAGGAGATTTTTCAGATCCTGTGACTTCTGCAACCCTCAGCATAGTTCAGGTAAAGATTTATTTTCAAATGTGGTTATCAAAACCAAGTTTTCTGGGGTTTGGACAAAAGCTCGCTCAGAGGAAGCATTTTCCTTCTGTGAACTGGCTTATTTCTTATTCAAAGTACTCAACGGCATTGGAATCCTTTTATGAGCAATTCGATCCAGATTTTATAAACATTAGGACAAAGGCTCGTGAAGTACTGCAAAGAGAAGATGACCTGAATGAAATTGTCCAGCTTGTAGGTAAGGATGCCTTAGCTGAAGCAGACAAGATCACATTAGAAACTGCAAAGCTTTTAAGAGAGGATTATCTTGCTCAGAATGCTTTTACACCATATGACAAATTCTGTCCCTTCTTCAAGTCTGTTTGGATGATGCGCAATATTATCCATTTCTACAATTTGGCAAATCAGGCCGTAGAGAGAGGAGCTGGTACAGATGGTCAGAAGATAACTTACAGCACCTCATCACATCGTCTGGGAGATCTCTTCTATCGTTTAGTGTCTCAGAAATTTGAGGATCCAGCAGAAGGTGAAGCTGCTTTGGTTGCTAAATTTAAGCAGCTACATGAGGACTTGACTAATGGTTTCCGCAACCTTGACGATGAAACCCGATAA 960 0.4104 FIGDAVINLLWSHLLTVYCFGIPGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRLWISSYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVKIYFQMWLSKPSFLGFGQKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEADKITLETAKLLREDYLAQNAFTPYDKFCPFFKSVWMMRNIIHFYNLANQAVERGAGTDGQKITYSTSSHRLGDLFYRLVSQKFEDPAEGEAALVAKFKQLHEDLTNGFRNLDDETR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1095g00004 319 Gene3D - 158 309 IPR024034 -
Sebi1095g00004 319 Gene3D - 16 157 IPR027417 -
Sebi1095g00004 319 CDD ATP-synt_V_A-type_alpha_C 171 277 - -
Sebi1095g00004 319 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 24 154 IPR000194 GO:0005524
Sebi1095g00004 319 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 24 317 IPR022878 GO:0046034|GO:0046961
Sebi1095g00004 319 FunFam V-type proton ATPase catalytic subunit A 155 308 - -
Sebi1095g00004 319 ProSitePatterns ATP synthase alpha and beta subunits signature. 145 154 IPR020003 GO:0005524
Sebi1095g00004 319 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 167 250 - -
Sebi1095g00004 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 158 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1095g00004 Sebi-Chr1095 87650 91361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1095g00004 24 319 Primary Pumps ATPases(2) AT1G78900 84.158 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1095g00004 K02145 - gmx:100814929 515.383