Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1093g00008 ATGGCAGCAGCGGCTTCCGTGGACAAGCGTCTGTACAATACTAGCCTCCAACACGACGTCGTTCGGAGCTTTGAGTCAAGCCAGGAGGTAATGCGTGGGATGAAGAAGACACTGGAACCGCTGTTTCTATCCGATTCCTCAAGCGATGAGGAAAATGGAAATAATCTGAAGGAGCTGATTAGAAAGGGAAACACCGAAGTTGAAGCCTCCATCTTCGACCCTCGAGACGAGGGAACCTTGGACCACTGGATCCAACGGAGCGCCTCTCTTATCCGCCTCACAGGAAAGCACCCTTTCAACTCAGAGCCACCACTCTCACGCCTCATGCACTATGGCTTCATCACCCCTGTCCCACTCCACTATGTCCGTAACCATGGGCCCGTTCCCAAGGCCCGTTGGGAAGACTGGACCGTTGAGGTCTGCGGTCTTGTTAAGCGCCCGGCCCGTTTCACCATGGACCAGCTGGTCCACGACTTCCCTAGCCAAGAGTTCCCTGTCACACTCGTCTGTTCCGCTAACCGTCGCAAGGAACTCAACATGGTGAAGCAGAGCATCGGCTTCAACTGGGGACCTGCTGCCACTTCCACTTCTGTGTGGCGCGGTGTACCGTTGAGGACTGTGCTCAAGCGATGTGGGATTTATAGCCGCAATAGTGGGGCCCACTATGTTTGTTTCGAAGGCGCGGATGAACTGCCAGGTGGCGGTGGGTCCAATTACGGAACAAGTATCGTGAGGGAAGTTGCACTGGATCCCTCCCGCGACATCATCCTTGCTTACATGCAAAACGGTGAGCTTTTGGCTCCGGATCATGGGTTTCCATTACGGGTCATAATACCGGGTTTCACCGGTGGCCGCATGGTGAAATGGCTGAAGCGCATCGTTGTCACTAACCATGAATCAGATAGCTATTACCATTACCATGATAACAGAGCACTCCCCTCCCATGTTGATGCCGAGCTTGCCAATGCAGAAGGTTGGCTGTACAAGGCAGAGTATGTCATCAACGAAATGAACATAAACTCGGTGATAACGACCCCGTGCCACGATGAAATTTTGCCCATCAACTCATGGACTACTCAGAGGCCTTATGTACTCAGAGGCTTCGCATATTCCGGGGGTGGGAGAAAGGTGACACGTGTTGAGGTGACAATGGATGGTGGTGAAACGTGGCAAGTATGCAGGTTGGAGCATCCAGAGAAGCCCAATAAATATGAGGTGTTGCACTTGCTTGGAGCCAAGGAGATTGCAGTGCGCGCTTGGGATGAAGCCCTCAACACCCAACCTGAGAAGCTTAATTGGAATCTTATGGGCATGATGAATAATTGTTGGTTCAGAGTCAAAACCAACGTGTGCAAGTCCCATAAAGGAGAGATTGGCATAGTGTTCGAGCACCCGACCCAACCAGGTAACCAATCTGGTGGTTGGATGGCCAAACAAAGACATGTAGAGAAGTCAGAGTCTAATCCAACCAATAAGAAGAATGTCTTGTCAATGTTCATGAAAAATTCTAGCTTAAAGAAGTATACAATGTCAGAAGTCAAAAAGCATAATAACATTGATTCAGCTTGGATGATCGTCCATGGCCACGTTTACGATTGTACCCACTATCTCAAAGATCACCCTGGTGGCATCGATAGCATCCTCATTAATGCCGGCACAGATTGTACAGAGGAGTTTGAAGCTATTCACTCTGACAAAGCCAAGAAAATGATCGAGGATTATCGAATCGGTGAGCTCATGACCACTGACTACACCTCTGATTCATTGCCAAATAACTCCAGGCATAACAATTTTGACACCATTCATTCAACCCTGGTCAAGGAAGTTACAACTCTACGTAGTGTGGCTCTAATGAACCCACGTGAGAAGATTTCATGCAAGCTCTTGTCCAAAACGTGTATCTCCCAAGACGTTAGGATCTTCCGTTTTGCATTGCCTTCCAAGGACCAACTATTGGGTTTACCGGTAGGGAAGCACTTATTCTTATGTGCCACCATTAACGATAAGCTATGCATGCGAGCTTACACTCCATCAAGCACTGGGGACGAAGTGGGGTACTTCGATCTAGTGATCAAGATTTACTTCAAAGGGGTCCACCCAAAGTTCCCTATTGGTGGCCTTATGTCTCAACATTTAGACTCCCTACCTATTGGCTCAATCTTGGATGTGAAAGGTCCATTAGGCCACATAGAATACATTGGTAAAGGCAACTTTTTGGTTCATGGAAAACACAAGTTTGCCAAAAGGCTAGCCTTGTTGGCCGGTGGGACTGGGATCACACCTATTTACCAAGTGGCCCAAGCGATTCTCAAGGACCCAGAGGATCACACTGAAATGCATGTCATATACGCAAACCGGACTGAGGAGGATATATTGCTAAGGGAAGAGCTTGATGCATGGGCTAAGAAGCATGTACAATTCAAGGTGTGGTATGTAGTACAAGAAAGCGTAAAAGAAATGTGGGAATACAGTGTAGGGTTCATCACGGAAAGTATCATGAGGGAGCATGTTCCTCGGGCATCTCAAGATACATTAGCATTGGCCTGCGGACCACCACCTATGATTCAATTTGCAGTGCAACCAAATTTGGAGAAGTTGGGCTATGACATCAAGAACAACTTGCTTGTGTTTTAA 2634 0.4818 MAAAASVDKRLYNTSLQHDVVRSFESSQEVMRGMKKTLEPLFLSDSSSDEENGNNLKELIRKGNTEVEASIFDPRDEGTLDHWIQRSASLIRLTGKHPFNSEPPLSRLMHYGFITPVPLHYVRNHGPVPKARWEDWTVEVCGLVKRPARFTMDQLVHDFPSQEFPVTLVCSANRRKELNMVKQSIGFNWGPAATSTSVWRGVPLRTVLKRCGIYSRNSGAHYVCFEGADELPGGGGSNYGTSIVREVALDPSRDIILAYMQNGELLAPDHGFPLRVIIPGFTGGRMVKWLKRIVVTNHESDSYYHYHDNRALPSHVDAELANAEGWLYKAEYVINEMNINSVITTPCHDEILPINSWTTQRPYVLRGFAYSGGGRKVTRVEVTMDGGETWQVCRLEHPEKPNKYEVLHLLGAKEIAVRAWDEALNTQPEKLNWNLMGMMNNCWFRVKTNVCKSHKGEIGIVFEHPTQPGNQSGGWMAKQRHVEKSESNPTNKKNVLSMFMKNSSLKKYTMSEVKKHNNIDSAWMIVHGHVYDCTHYLKDHPGGIDSILINAGTDCTEEFEAIHSDKAKKMIEDYRIGELMTTDYTSDSLPNNSRHNNFDTIHSTLVKEVTTLRSVALMNPREKISCKLLSKTCISQDVRIFRFALPSKDQLLGLPVGKHLFLCATINDKLCMRAYTPSSTGDEVGYFDLVIKIYFKGVHPKFPIGGLMSQHLDSLPIGSILDVKGPLGHIEYIGKGNFLVHGKHKFAKRLALLAGGTGITPIYQVAQAILKDPEDHTEMHVIYANRTEEDILLREELDAWAKKHVQFKVWYVVQESVKEMWEYSVGFITESIMREHVPRASQDTLALACGPPPMIQFAVQPNLEKLGYDIKNNLLVF 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1093g00008 877 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 751 770 IPR001709 GO:0016491
Sebi1093g00008 877 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 845 853 IPR001709 GO:0016491
Sebi1093g00008 877 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 673 680 IPR001709 GO:0016491
Sebi1093g00008 877 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 821 837 IPR001709 GO:0016491
Sebi1093g00008 877 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 789 800 IPR001709 GO:0016491
Sebi1093g00008 877 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 539 549 IPR001709 GO:0016491
Sebi1093g00008 877 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 777 786 IPR001709 GO:0016491
Sebi1093g00008 877 PANTHER SULFITE REDUCTASE 17 453 - -
Sebi1093g00008 877 Pfam Mo-co oxidoreductase dimerisation domain 332 450 IPR005066 GO:0016491|GO:0030151
Sebi1093g00008 877 Pfam Cytochrome b5-like Heme/Steroid binding domain 509 579 IPR001199 -
Sebi1093g00008 877 CDD eukary_NR_Moco 76 448 - -
Sebi1093g00008 877 FunFam Sulfite oxidase, mitochondrial 503 584 - -
Sebi1093g00008 877 Pfam Oxidoreductase NAD-binding domain 752 859 IPR001433 GO:0016491
Sebi1093g00008 877 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 500 585 IPR036400 -
Sebi1093g00008 877 Gene3D Translation factors 612 727 - -
Sebi1093g00008 877 FunFam Nitrate reductase [NADH] 728 877 - -
Sebi1093g00008 877 SUPERFAMILY Riboflavin synthase domain-like 616 734 IPR017938 -
Sebi1093g00008 877 PIRSF Nitr_rd_NADH 5 876 IPR012137 GO:0006809|GO:0042128|GO:0050464
Sebi1093g00008 877 Gene3D - 75 325 IPR036374 -
Sebi1093g00008 877 Gene3D - 500 581 IPR036400 -
Sebi1093g00008 877 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 73 333 IPR036374 -
Sebi1093g00008 877 FunFam Nitrate reductase 336 498 - -
Sebi1093g00008 877 Gene3D - 728 877 IPR039261 -
Sebi1093g00008 877 PRINTS Cytochrome B5 signature 540 554 IPR001199 -
Sebi1093g00008 877 PRINTS Cytochrome B5 signature 530 540 IPR001199 -
Sebi1093g00008 877 PRINTS Cytochrome B5 signature 555 562 IPR001199 -
Sebi1093g00008 877 PRINTS Cytochrome B5 signature 567 579 IPR001199 -
Sebi1093g00008 877 SUPERFAMILY E set domains 336 450 IPR014756 -
Sebi1093g00008 877 Pfam Oxidoreductase FAD-binding domain 626 732 IPR008333 -
Sebi1093g00008 877 SMART Cyt_b5_2 508 580 IPR001199 -
Sebi1093g00008 877 FunFam NADH-cytochrome b5 reductase 611 727 - -
Sebi1093g00008 877 PRINTS Cytochrome B5 reductase signature 789 800 - -
Sebi1093g00008 877 PRINTS Cytochrome B5 reductase signature 652 663 - -
Sebi1093g00008 877 PRINTS Cytochrome B5 reductase signature 673 680 - -
Sebi1093g00008 877 PRINTS Cytochrome B5 reductase signature 718 732 - -
Sebi1093g00008 877 PRINTS Cytochrome B5 reductase signature 845 853 - -
Sebi1093g00008 877 PRINTS Cytochrome B5 reductase signature 751 770 - -
Sebi1093g00008 877 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 720 871 IPR039261 -
Sebi1093g00008 877 PRINTS Eukaryotic molybdopterin domain signature 250 266 IPR008335 GO:0016491
Sebi1093g00008 877 PRINTS Eukaryotic molybdopterin domain signature 166 177 IPR008335 GO:0016491
Sebi1093g00008 877 PRINTS Eukaryotic molybdopterin domain signature 113 129 IPR008335 GO:0016491
Sebi1093g00008 877 PRINTS Eukaryotic molybdopterin domain signature 267 280 IPR008335 GO:0016491
Sebi1093g00008 877 PRINTS Eukaryotic molybdopterin domain signature 283 296 IPR008335 GO:0016491
Sebi1093g00008 877 PRINTS Eukaryotic molybdopterin domain signature 365 379 IPR008335 GO:0016491
Sebi1093g00008 877 PRINTS Eukaryotic molybdopterin domain signature 177 189 IPR008335 GO:0016491
Sebi1093g00008 877 PRINTS Eukaryotic molybdopterin domain signature 192 207 IPR008335 GO:0016491
Sebi1093g00008 877 PRINTS Eukaryotic molybdopterin domain signature 379 391 IPR008335 GO:0016491
Sebi1093g00008 877 PRINTS Eukaryotic molybdopterin domain signature 91 105 IPR008335 GO:0016491
Sebi1093g00008 877 PRINTS Eukaryotic molybdopterin domain signature 334 346 IPR008335 GO:0016491
Sebi1093g00008 877 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 505 580 IPR001199 -
Sebi1093g00008 877 Pfam Oxidoreductase molybdopterin binding domain 125 304 IPR000572 -
Sebi1093g00008 877 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 621 733 IPR017927 GO:0016491
Sebi1093g00008 877 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 536 543 IPR018506 GO:0020037
Sebi1093g00008 877 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 142 177 IPR022407 GO:0043546
Sebi1093g00008 877 CDD cyt_b5_reduct_like 626 877 - -
Sebi1093g00008 877 FunFam Nitrate reductase 77 326 - -
Sebi1093g00008 877 Gene3D - 336 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1093g00008 Sebi-Chr1093 106241 110474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1093g00008 618 868 NADPH P450 reductases AT5G17770 39.370 4.84e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1093g00008 K10534 - gmx:732634 1410.97