Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1093g00002 ATGAATGTGTCATCGATTCCAATAGTCGAAGATGTAGAGAAATGGGTCAATAATATTCATGGAAATATTGTGCAACATGGCCAAGGGAGTGTTGTTGAATATTCATCACAATTGGAAATGGAGTTTGAATCCGAGGTAGAGGCCTATGAATTTTATAATGAGCACAGTAGAAGAAATGAGTTTGGTATTCGTAGAGAATATGGAAATAAAAGTAAAAAAGATGGAATCTTGACTTCAAGAAGATTCTCATGCTTCAGAGAGGGTAAACGAGGCATTAACAAACGAGACCACTTGATGAAAGAGCCTAGAGCAGAAACCAGAACAGGATGTGAAGCACAGTATGTTCATTTGATTCGCTCTCATCGACACATATTAGAGTCACAAGCATCACAAATTGTATTAGCGGATGAATCTGGATTGAAGCCAAAAGATTTTCATGAATACATGCCCAAGCAAGCTGGTGGAATATACACTGTTGGTTATACAAAACAAGACCATAAGAATTACCTTCGGACTAGAAGGAAACAATCTTTAAGTCATGATTTGAAAGTTTTGGATGTGATGAATATCAAACTAATTCCTCAACACTATATACTCAAGCGATGGATAAGAGATGCAAGGTTTGGAGCTAAAAAGTCTATGGATGGAGGAGAATCAATGGCAATGTGTGATGTATCCATATCATTAGCAAATGGAAGTATTGACAACAATGTGAACACCATTGATTTTGGTGGGGCAAAAGGCATAAAGAAGCGAGATTGCTCATATAAGAGTAAAAAACAGCCTAAATCTTGGGTTGAGAAATTGGCTAGAAAGAGAAAGCAACTTCAATCTGTACAAACAAGAGCCACTGCACATTGCAAAGAATCCAAACAGTCCCAGCCATTGCAAGACGATCCAAACAGTCCTAGCAGCACATTGCAAATAGTTTTAGGATTTGCAAATAGTCCTAGCACACTTCTGCTCAAAGGGCTTAGTTGCATAGAAGGCATAACTCCTGCAAGGTGA 1008 0.3819 MNVSSIPIVEDVEKWVNNIHGNIVQHGQGSVVEYSSQLEMEFESEVEAYEFYNEHSRRNEFGIRREYGNKSKKDGILTSRRFSCFREGKRGINKRDHLMKEPRAETRTGCEAQYVHLIRSHRHILESQASQIVLADESGLKPKDFHEYMPKQAGGIYTVGYTKQDHKNYLRTRRKQSLSHDLKVLDVMNIKLIPQHYILKRWIRDARFGAKKSMDGGESMAMCDVSISLANGSIDNNVNTIDFGGAKGIKKRDCSYKSKKQPKSWVEKLARKRKQLQSVQTRATAHCKESKQSQPLQDDPNSPSSTLQIVLGFANSPSTLLLKGLSCIEGITPAR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1093g00002 335 MobiDBLite consensus disorder prediction 280 304 - -
Sebi1093g00002 335 Pfam FAR1 DNA-binding domain 50 114 IPR004330 -
Sebi1093g00002 335 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 37 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1093g00002 Sebi-Chr1093 22666 25918 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi1093g00002 FAR1 2.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1093g00002 - - psat:127085847 218.779