Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi108g00053 ATGTCCATGTTCGAAGAAAATGAGACATCTATGGGTTTGGACGATATAACCTCTCAACAGGGTGACGATTATGACGGTAGTCGAGGTCCATGTGATGATGCTATTGGGTTTGATGAAGATGATTTTAATGATATTAAGAAGATTGATATGAAAAATATCGGTGAAGATGATCTTCGTAAATATGATTTTGCCGATCTAGATGTGGCCCACAATTTCTACAGATGGTATGGTAGGTCGAATGGGTTCTCTGTTCGTAAAAGCAATGTAGTACCGAATAGTAAGGGTGACATTTTGCAGCAAACATTTGTTTGTTCTACACAAGGACATAGAAGGGCTAGGCGTTCCACAAGAAGTTCTAAAAAGAGACAATCGAAACCGCTAACAAGGTTTGATTGTAAAGCAATGTTTCGTGTTCACATCAACGTTAACTCAGGCCGATGTGCAGTTCTTAACAAAGCATCTCTAATGAAGAGCCCATTCAAATTAACTATTCGTGCCTACGAATGGAATCCATAG 516 0.3915 MSMFEENETSMGLDDITSQQGDDYDGSRGPCDDAIGFDEDDFNDIKKIDMKNIGEDDLRKYDFADLDVAHNFYRWYGRSNGFSVRKSNVVPNSKGDILQQTFVCSTQGHRRARRSTRSSKKRQSKPLTRFDCKAMFRVHINVNSGRCAVLNKASLMKSPFKLTIRAYEWNP 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi108g00053 171 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 148 - -
Sebi108g00053 171 MobiDBLite consensus disorder prediction 1 28 - -
Sebi108g00053 171 Pfam FAR1 DNA-binding domain 71 149 IPR004330 -
Sebi108g00053 171 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi108g00053 Sebi-Chr108 1797493 1799391 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi108g00053 FAR1 1.4e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi108g00053 - - tpra:123886262 127.487