Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi108g00031 ATGGCTTTGTGTTCTGTTATTTTCAATCTTCTTCTAATTCTTCTTATCTCTTCCACCAAAGAAGCTTTTGGTTCATACCTTAGCCAAGAGGTATTAGCACAGCAAGAAGCTGACAGAGTATATAGATTACCAGGGCAACCTTCTGTGAAGTTCAATCAATATGCTGGCTATATCACTGTCAATCAAACTCATGGAAGAGCACTGTTCTATTGGTTCTTTGAATCCATTGAAAATCCTGAAGATAAACCTCTTCTCCTTTGGCTCAATGGAGGCCCCGGTTGTTCCTCAATTGGTTATGGAGAAGCAGAGGAGCTAGGACCCTTCTTTCCCCAAAACAGCATCGAACCAAAGCTAAAATTGAACCCTTATTCTTGGAACAGAGCTGCAAATCTTTTGTTTCTGGAATCCCCTGTTGGAGTGGGATTCTCCTACACCAACACCAGCAGTGATATAAATGAGCTTGGTGACACCATTACTGCTAAGGATTCACACAACTTTGTCATCAATTGGTTTAGGAGATTTCCACAATTCAGATCACACGAGTTCTACATTGCTGGTGAAAGCTATGCAGGGCACTATGTTCCACAACTTTCTGAGCTCATTTTCGATAATAATCATAATCCTTCCAAGGAAGACTACATTAACTTCAAAGGGATCATGATTGGAAATGCACTAATGAATGATGAAACAGATCAAAAGGGTATGATAGATTATGCGTGGGATCATGCTGTGATATCTGATGGATTATACCATAACATCACAAGCACATGCGATTTCAGCCTTCCAAATCAAACAAATGAATGCAATGTGGAACTCAATAAGTACTTTGATGTGTATAAAATCATTGACATGTATAGCTTGTACGCTCCAAGGTGTTTCAGCAACAGTAGCAGCAGCAGAAAGGAAATCCCTGTTGTCAAAGGCGTAGCCCCTCATTCTTTTTCCAAATTTGATGGGTGGCATAAAAAACCAGCTGGGTATGATCCATGTGCATCGGATTATACTGAAGTGTACCTAAATAGGCCAGAAGTTCAAAAGGCACTCCATGCCAATGTCACTAAAATTCCTTATCCATGGACTCACTGCAGCGATAATATCACATTTTGGAATGACGCACCACATTCCACGCTTCCTGTCATCAAGAAGCTTATTGCCGGTGGAATTCGGATATGGGTTTACAGTGGAGATACCGATGGAAGAATTCCTGTGACTGCAACAAGATATACATTAAGAAAACTGGGGCTGAGTATTGTGGAAGATTGGACTCCCTGGTATACAAGCCGGCAGGTGGGAGGATGGAGCATTGTATTTGATGGGCTCACTTTTGTGACGATAAGAGGTGCTGGTCATCAGGTTCCTACTTTCGCTCCCAAGCAAGCTCTTCAGCTACTTCGACACTTCCTTGTCAATAAGAAGTTACCCCATCATCCAATTTAA 1437 0.4154 MALCSVIFNLLLILLISSTKEAFGSYLSQEVLAQQEADRVYRLPGQPSVKFNQYAGYITVNQTHGRALFYWFFESIENPEDKPLLLWLNGGPGCSSIGYGEAEELGPFFPQNSIEPKLKLNPYSWNRAANLLFLESPVGVGFSYTNTSSDINELGDTITAKDSHNFVINWFRRFPQFRSHEFYIAGESYAGHYVPQLSELIFDNNHNPSKEDYINFKGIMIGNALMNDETDQKGMIDYAWDHAVISDGLYHNITSTCDFSLPNQTNECNVELNKYFDVYKIIDMYSLYAPRCFSNSSSSRKEIPVVKGVAPHSFSKFDGWHKKPAGYDPCASDYTEVYLNRPEVQKALHANVTKIPYPWTHCSDNITFWNDAPHSTLPVIKKLIAGGIRIWVYSGDTDGRIPVTATRYTLRKLGLSIVEDWTPWYTSRQVGGWSIVFDGLTFVTIRGAGHQVPTFAPKQALQLLRHFLVNKKLPHHPI 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi108g00031 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Sebi108g00031 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Sebi108g00031 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Sebi108g00031 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Sebi108g00031 478 FunFam Carboxypeptidase 376 470 - -
Sebi108g00031 478 Gene3D - 330 367 - -
Sebi108g00031 478 FunFam Carboxypeptidase 34 294 - -
Sebi108g00031 478 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
Sebi108g00031 478 Pfam Serine carboxypeptidase 45 469 IPR001563 GO:0004185|GO:0006508
Sebi108g00031 478 Gene3D - 376 469 - -
Sebi108g00031 478 Gene3D alpha/beta hydrolase 34 294 IPR029058 -
Sebi108g00031 478 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 457 IPR001563 GO:0004185|GO:0006508
Sebi108g00031 478 ProSitePatterns Serine carboxypeptidases, histidine active site. 440 457 IPR033124 GO:0004185
Sebi108g00031 478 SUPERFAMILY alpha/beta-Hydrolases 34 475 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi108g00031 Sebi-Chr108 1160581 1169486 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi108g00031 338 473 Calmodulin-binding Proteins AT2G22960 28.467 1.54e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi108g00031 K16297 - gmx:100797264 831.632