Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi108g00023 ATGGCCACTTTCTGGACCTCACTCTTTTACTTCCTCCTCACCACCACCGTTGCCTCCGGAAGACAATATTATTCCGGCGAGGAGGCACGGCAGCAGGAGGCTGACAGAGTGAAGAACTTGCCGGGACAACCACCAGTGAAATTCAGACACTATGCTGGCTATGTGAAGCTAAGACCACATGAAGAAAAGGCATTGTTCTATTGGTTCTTTGAAGCTCAAGAAGCACCCTCACAAAAACCTCTTGTGCTTTGGCTTAATGGAGGACCTGGTTGCTCGTCCATTGGCTATGGAGCTGCACGAGAGCTTGGTCCATTTCTTGTTGAAGACAAAGAACGCCTCAAACTTAACAAATTCTCTTGGAACAGAGTTGCAAATATCATATTCTTGGAGTCACCAGTTGGTGTTGGGTTTTCTTACACTAACAATTCCAAAGATCTACACGAGCTTGGGGATCGTGTTGCTGCTATTGATAACTATGCCTTCTTGGTTGGTTGGTTCAAAAGATTCCCAAACTTCAAATCCCACGATTTTTATATTGCTGGGGAAAGCTACGGAGGGCATTATGTTCCACAGCTAGCTGAGCTCATCTATGAAAGGAACAAAGATACCAAAAACGGCTCTTACATAAACCTCAAGGGATTCATGGTGGGAAATGCTGTGCTGAATGATCTTACAGATATAAATGGGTTGATAGATTATGCTTGGAGCCATGCCATCATATCAGACCAAGTATATCACGGGATAGTCAAAGACTGTGACTTTAGTAAAGAAAACCAAACAAAGGCTTGCGAGTTGCATGTTCAAGGGTTATTAGAAGCTTACTCCGAGATTGACATATATAGCATTTACTCACCCATTTGCCTCGATGACAATAAAACAAGAGTTTCACCCAAACTTGTGGTTGCTCCTCATCTTCTCACACGGCATGACATGTGGCATACACTACCATCAGGATACGATCCCTGTACAGAGGATTATCTAAGCAAATATTTCAATAATGAGGATGTTCAGAAGGCCCTACATGCCAATATTACCAACTTGTCATATCCCTATACCCTTTGCAGCGCTGTAATTGGGAAATGGAATGACTCGCCAGACACAGTTTTGCCGATTATTCAGAAGCTCCTAAATGCCGGTTTACGCATTTGGATCTACAGTGGGGACACTGATGGTAGAGTTCCGGTGACATCAACAAGATACAGCATAAACAAGATGAGTTTGAAAGTAAAGAAAGGGTGGAGAGCTTGGTTTCACAAACATCAAGTGGCAGGTTGGATGGAAGTGTATGAGAGTGACCTCACTTTTGCAACCATTAGAGGTGCTGGCCACCAAGTTCCTGTCTTTGCACCTCAACAATCCCTTTCTCTCTTCACCCATTTCCTCTCTTCTCAAACCCTCCCTTCTTCTCGCTTCTAG 1416 0.4393 MATFWTSLFYFLLTTTVASGRQYYSGEEARQQEADRVKNLPGQPPVKFRHYAGYVKLRPHEEKALFYWFFEAQEAPSQKPLVLWLNGGPGCSSIGYGAARELGPFLVEDKERLKLNKFSWNRVANIIFLESPVGVGFSYTNNSKDLHELGDRVAAIDNYAFLVGWFKRFPNFKSHDFYIAGESYGGHYVPQLAELIYERNKDTKNGSYINLKGFMVGNAVLNDLTDINGLIDYAWSHAIISDQVYHGIVKDCDFSKENQTKACELHVQGLLEAYSEIDIYSIYSPICLDDNKTRVSPKLVVAPHLLTRHDMWHTLPSGYDPCTEDYLSKYFNNEDVQKALHANITNLSYPYTLCSAVIGKWNDSPDTVLPIIQKLLNAGLRIWIYSGDTDGRVPVTSTRYSINKMSLKVKKGWRAWFHKHQVAGWMEVYESDLTFATIRGAGHQVPVFAPQQSLSLFTHFLSSQTLPSSRF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi108g00023 471 FunFam Carboxypeptidase 368 463 - -
Sebi108g00023 471 ProSitePatterns Serine carboxypeptidases, histidine active site. 433 450 IPR033124 GO:0004185
Sebi108g00023 471 Gene3D - 322 358 - -
Sebi108g00023 471 FunFam Carboxypeptidase 31 289 - -
Sebi108g00023 471 SUPERFAMILY alpha/beta-Hydrolases 32 468 IPR029058 -
Sebi108g00023 471 Gene3D alpha/beta hydrolase 31 288 IPR029058 -
Sebi108g00023 471 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Sebi108g00023 471 Gene3D - 368 462 - -
Sebi108g00023 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Sebi108g00023 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Sebi108g00023 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Sebi108g00023 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Sebi108g00023 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 450 IPR001563 GO:0004185|GO:0006508
Sebi108g00023 471 Pfam Serine carboxypeptidase 41 462 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi108g00023 Sebi-Chr108 1069816 1076877 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi108g00023 327 466 Calmodulin-binding Proteins AT2G22960 30.496 4.29e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi108g00023 K16297 - gmx:100799746 821.231