Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi108g00003 ATGAATATCTCCTCTAATTCTGTCACTCAATTTCCTAATGTCTCCGGAGCCAAAAATCTGAGAGAATTGAGGCTTGACAAATGCCTGAAACTGGTTACTGTTGATGGATCAGTTGGATTTCTTCCAAACCTTGTTTACTTAAGGGCTTCAGAATGTCCTCAGCTCAGACAATTTCTGCCAAGAATCTGTTTGCCATCTCTTGAATACCTTTCCTTTAATTTCTGCAGAGGACTCACACACTTCCCAGACATTGTGGGAAAAATGGACAAGCCATTAAAGGTTAGTATGATTGATACTGCTATCACAGAGTTTCCAGAATCCATTGACAAACTCACTGGGCTTAACTATCTTGAGATGACAGTATGTAAGGAACTCCAAGATCTACCAAGTAGCTTATTTATATTGCCAAATTTTGTCACATTAAAAATTGGTGGATGTTCTCAACTTCCTGAATCATTTAGAAAGTTCAAAGAAAGCCACTTAGCAGCACAGTGCCGCCCAAATTTAAGGACACTGCATTTCGGCTATGCTGATCTATTAGAGGAAGATATTGACGCAATTATTCACATTTTTCCAAACTTGGAAAACTTGAATGTATCGGGTAACAATTTTGTATCCCTCCCAGCTCACATTAAAGGATCTGTTTACCTGACAAGTCTTGATGTCAGTGGATGCAAGTTGCTTAAGGAAATTCCTGAATTGCCGTCAAGTGTTCATAAAGTAGATGCAAGAAAGTGCGATTCCATAAGTCAGAACACGTCAAGGATGTTATGGTCTCAGGTGCGTAAAGAGATTAATAGGCTAGAAGTTAAAATGCCCTTTATTCCATTTCATGAAATAGATGAAATAGAAGAAATGGTAAAACAAGAAGCTCTTGAAAAAATTGAGGAAATTACTGAGGCTTTTGAAGAATATATAAAAAAACAAGAAGCTCTTGAAAAAATTGAGGAAACTACTGAGGCTTTTGAAGAAATAGAAAAACTCATTGTGATGCCCACATGGTTCGACCATAGTAACAAAAGAGGGATTCCGGTTTTCAGGGCTCGTGGGAAGTTCCCGGTTGTTGTTTTAGCATTTGTGTTCGGGAAAGTGAATGACATGGCCATTACCAGTTCTTTTAGAGATCACATGCAAGTTGGTCTACACCTGTTCATTGAGGGCCTACATGTACATAGCAGTCAGTGCCGTAAATTCATCCTTGCAAAGGGTCATGTGTTGTTGTGTGACCTACGAGTTTTGTTCAGCGAGGAAGAGTGGGAAGGGCTTCATGCACGTGTTGGGGATGATTGGAAGACCGTGCAGGTCGATTGTGAAACAGATTTGAGCCTATTTTACTGGGGAGTTTATGTGTACAAGCAAGAGACAAACATGGAAGATATCGAGTTTGACGTTCAAGATCCCAGTTCCTCGGGAATTAGCAGGCCGTGGTCTTTGGTTTCGATGAATCAAGAGGACAAGGTGAGGAATATGCTAGCATGTTGGGATCCAATGCCAAAAATGTACGAGAAGATGTTGAGGGATGGTAGTTACTACAATATGAGTGCACTAGAAATGGCATCCAGGTGGAGACTGTCGAGGAGGGTTATGGCTCTAAGGGAGGGGAAAGGTGCTTCTGGGTCAGAGCTAGAAGACGAGGATGAGGAGGAGGACGATTTTATGCTTCAAGTACATTCAAGGCTCGTCTCAGGTGAGGGTGACGAAGAGATCATGGTTTCTTTAGGTTTCACCTGGTACCCAATAATAACAAAAATACTAAAATCTGTCGTAAAT 1770 0.4085 MNISSNSVTQFPNVSGAKNLRELRLDKCLKLVTVDGSVGFLPNLVYLRASECPQLRQFLPRICLPSLEYLSFNFCRGLTHFPDIVGKMDKPLKVSMIDTAITEFPESIDKLTGLNYLEMTVCKELQDLPSSLFILPNFVTLKIGGCSQLPESFRKFKESHLAAQCRPNLRTLHFGYADLLEEDIDAIIHIFPNLENLNVSGNNFVSLPAHIKGSVYLTSLDVSGCKLLKEIPELPSSVHKVDARKCDSISQNTSRMLWSQVRKEINRLEVKMPFIPFHEIDEIEEMVKQEALEKIEEITEAFEEYIKKQEALEKIEETTEAFEEIEKLIVMPTWFDHSNKRGIPVFRARGKFPVVVLAFVFGKVNDMAITSSFRDHMQVGLHLFIEGLHVHSSQCRKFILAKGHVLLCDLRVLFSEEEWEGLHARVGDDWKTVQVDCETDLSLFYWGVYVYKQETNMEDIEFDVQDPSSSGISRPWSLVSMNQEDKVRNMLACWDPMPKMYEKMLRDGSYYNMSALEMASRWRLSRRVMALREGKGASGSELEDEDEEEDDFMLQVHSRLVSGEGDEEIMVSLGFTWYPIITKILKSVVN 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi108g00003 590 PANTHER LEUCINE-RICH REPEAT-CONTAINING 99 332 - -
Sebi108g00003 590 Coils Coil 288 328 - -
Sebi108g00003 590 Gene3D Ribonuclease Inhibitor 92 259 IPR032675 -
Sebi108g00003 590 Gene3D Ribonuclease Inhibitor 1 91 IPR032675 -
Sebi108g00003 590 SUPERFAMILY RNI-like 2 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi108g00003 Sebi-Chr108 113329 115364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi108g00003 5 157 WRKY Transcription Factor Family AT4G12020 32.692 2.86e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi108g00003 - - gmx:100801890 462.996