Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1088g00005 ATGTCTATGTTCGAAGAAAATGAGACATCTGTGGGTTTGGATAACATAACCTCTCAACAGAGTGATGATTATGACAGTAGTCAAGGTCTATGTGATGATGCTATTTGTTCTGACGAAGGTGAAGAATTCTTAAGTGAAGAAAGCATGCAAGATGATTGTTTTGAAGATGTCATTATGATAGATGATTTTAAGGATATTAAGAAGATTGATATGAAAAATATCAGTGAAGATGATGTTTGTAAATATGAATTTGCCGATCTAAATGTGGCCCACGAATTCTACAGTTGGTATGGTAGGTCGAATAGGTTCTATGTTCGTAAGAGCAATGTAGTACCAAACAGTAAGGGTGACATTTTGCAGCAAACATTTGTTTGTTTTGCACAAGGATTTAGAAGGGCTAGCCGCTCCACAAGAAGTTCTAAAAAGAGAAAACTGAGATCGAAAATGATGTTTGATTGTAAAGCAGTGTTCCATATTCACATCAATATTAACTCAGACTGA 501 0.3533 MSMFEENETSVGLDNITSQQSDDYDSSQGLCDDAICSDEGEEFLSEESMQDDCFEDVIMIDDFKDIKKIDMKNISEDDVCKYEFADLNVAHEFYSWYGRSNRFYVRKSNVVPNSKGDILQQTFVCFAQGFRRASRSTRSSKKRKLRSKMMFDCKAVFHIHININSD 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1088g00005 166 Pfam FAR1 DNA-binding domain 92 162 IPR004330 -
Sebi1088g00005 166 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 160 - -
Sebi1088g00005 166 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1088g00005 Sebi-Chr1088 54862 55461 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi1088g00005 FAR1 9.6e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1088g00005 - K24576 tpra:123886262 110.153