Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1087g00001 ATGAGGCCCCTAATTGCGGCGTTATCCTTCCATCAGTTCTTTGAAGGGTTTGCACTTGGTGGCTGCATCGCTGAAGCCCAATTCAAGACCTTATCGGCAACAATAATGGCTTGTTTTTTTGGACTAACGACGCCACTGGGTGTTGCCATTGGGACTGGTATTGCTTCAATTTTTAACCCTTACAGTCCAGGAGCGCTCGTTGCAGAGGGCATCTTGGACTCCTTGTCAGCTGGGATTTTAGTGTATATGGCTTTAGTGGACTTAATAGCTGCTGATTTTCTCAGCAAGAGAATGCGTTGTAACTTTAAGCTGCAGATAGTGTCTTACTGTTTGCTTTTCCTTGGGGCTGGATTGATGTCTTCACTCGCAATTTGGGCATGA 381 0.4593 MRPLIAALSFHQFFEGFALGGCIAEAQFKTLSATIMACFFGLTTPLGVAIGTGIASIFNPYSPGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMRCNFKLQIVSYCLLFLGAGLMSSLAIWA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1087g00001 126 PANTHER ZINC/IRON TRANSPORTER 2 119 - -
Sebi1087g00001 126 Pfam ZIP Zinc transporter 3 123 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1087g00001 Sebi-Chr1087 2669 3049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1087g00001 1 126 Inorganic Solute Cotransporters AT1G10970 82.540 5.34e-71 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1087g00001 K14709 - gmx:100809426 223.016