Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1086g00002 ATGGCTCTTCCCGGTTCACTGCAGCTGTCCCATGGATTGGGACTTTGCAGGAACCTGGGCTACAATAAACATCCGAGGGTAACAGGAAGATGCAAGTTACATTTATCAAATGCAGGCCAACCAAGTAAGCTCCCTACTGTTGAGGTGGCTACTACAGTGCTGACAAGGTGTTGTAATGTGTTACAAAATAGTCCAGTCCTTGTAAAGTTGATTCCTGCTGTTGGCATTATCATTTTTGCAGTATGGGGTGTCGGTCCATTAATGTTTCAGACAAGGAAACTGTTTTTTCAGAGGAGTGATAATAGTTGGAAGAAAAGTACCACTCATTATATAGTAACTTCTTACCTTCAGCCATTGCTGTTATGGACTGGAGCCATACTTATTTGCAGAGCATTGGAGCCACTAATTCTACCTACAGAAACTGGTCAGGTTGTTAAGGAACGGCTTTTGAATTTTGTAAGATCATTGTCGACTGTACTGGCCTTTGCCTATTGTTTATCAAGTGTAATTCAACAAGCACAGAAATTTTTCACGGAGAGTGCTGATGCAAGTGAGACGAGAAATATGGGATTCCAATTTGCAGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCCTTTTCATTGTTCATGGAATTGCTGGGCTTCTCTACCCAGAAATGGGTTACTGCAGGAGGTCTTGGGACAGTGTTGTTAACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGCGCGATGATTCATGCAACCCGGCCATTTGTGGTTAATGAATGGATTCAAACAAAGATAGAAGGATATGAGGTTTCTGGTACTGTTGAGCATGTTGGTTGGTGGTCACCAACAATTATAAGAGGTGAAGATCGTGAAGCTGTGCACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGGAACCTTAGTCAGAAAACACATTGGCGAATCAAAACCCACCTGGCCATTAGTCATTTGGATAACATTGTTGCTGACATGCGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTTTTGGACAATATAAATCCTGAAAATCAGGCTCTTATGATTCTGGTGTCTTGTTTTGTCAAGACCTCACATTTTGAAGAATATTTATGTGTTAAGGAAGCCATACTATTGGACCTTCTTAGAGTTATCGGCCATCACCGGGCTCGACTTGCAACACCAGTCCGTACCCTGCAGAAAATATACAGTGATGCTGACTTGGAGAACATACCATATGCAGATTCCACATTTAGTGGTGCTGGAACAGTATCTAACCGTCCATTATTAATGATTGAATCATCTCACAAGATCAATGGAGATGATAAGATGAAAAGTCGATCAGCACGACCAGCTGTTGATCAAGATAACAAGACTGCACGATCCAAACATGAAACAAAGACAGACGACAAGGCAGGACCAGCAGGAGTACCAGATAACAAGGTTAGAGGAACTCAAGATGACTCTGAGGTGGATACCAAAGTTGTGGTATCTATTTCTGATGCAAATGGAAACTCTAAGACCGCTGTGACACCCAGACCTGATCCTGAAGTGGGTGAAAACAAGCCACTGAAATCAAATTCAAACAAGGCAAATGTGGAGGTTCCAGATATGTCTTTTAACTCCGAAATATCTGCTTTGGTAGTGGATAATTCAACCCAGAAGGACATCCATGTCAAACAATCCAAGGTTGAGACCATTAAAAACATCAAGCCGAACATTGACTCTGACAATGTAGTTTCCTCCTCCTCCTCGACTAATAATGCTGACAAAGCAAGTGGACTTCCTACGAATATGCCAACAAAACAGCAAGGAGAAAGGAAACCTATTGCACAGCCTCATGCATCCAGGCCTGTTCTTGAAGAGAACATAGTACTGGGTGTTGCATTGGAGGGATCAAAGAGGACCCTTCCCATTGATGAAGGGATTGACACTATGACAACTCAAGAGTCAAAGGAAATGGCTACATTCCAGGGCGGAAATGGACTTCCAAAGGCTGCAGACGGGAATGTCAAGTAA 2046 0.4252 MALPGSLQLSHGLGLCRNLGYNKHPRVTGRCKLHLSNAGQPSKLPTVEVATTVLTRCCNVLQNSPVLVKLIPAVGIIIFAVWGVGPLMFQTRKLFFQRSDNSWKKSTTHYIVTSYLQPLLLWTGAILICRALEPLILPTETGQVVKERLLNFVRSLSTVLAFAYCLSSVIQQAQKFFTESADASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALMILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKIYSDADLENIPYADSTFSGAGTVSNRPLLMIESSHKINGDDKMKSRSARPAVDQDNKTARSKHETKTDDKAGPAGVPDNKVRGTQDDSEVDTKVVVSISDANGNSKTAVTPRPDPEVGENKPLKSNSNKANVEVPDMSFNSEISALVVDNSTQKDIHVKQSKVETIKNIKPNIDSDNVVSSSSSTNNADKASGLPTNMPTKQQGERKPIAQPHASRPVLEENIVLGVALEGSKRTLPIDEGIDTMTTQESKEMATFQGGNGLPKAADGNVK 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1086g00002 681 Gene3D - 255 310 IPR023408 -
Sebi1086g00002 681 MobiDBLite consensus disorder prediction 500 519 - -
Sebi1086g00002 681 MobiDBLite consensus disorder prediction 580 627 - -
Sebi1086g00002 681 SUPERFAMILY Sm-like ribonucleoproteins 239 309 IPR010920 -
Sebi1086g00002 681 MobiDBLite consensus disorder prediction 446 485 - -
Sebi1086g00002 681 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 15 664 IPR045042 -
Sebi1086g00002 681 Gene3D - 149 253 - -
Sebi1086g00002 681 MobiDBLite consensus disorder prediction 580 614 - -
Sebi1086g00002 681 MobiDBLite consensus disorder prediction 446 541 - -
Sebi1086g00002 681 Pfam Mechanosensitive ion channel 196 397 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1086g00002 Sebi-Chr1086 9132 15613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1086g00002 629 681 Mechanosensitive Ion Channel Family AT5G10490 58.929 2.49e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1086g00002 K22047 - gmx:100789444 1061.6