Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1085g00002 ATGGGAGATTCTGCACTGATCGTGGAGTTAAGGCTCCACTTGGATATGTTGAAACTGATCCTTCTGGTCGATATGGGCGTGGATGTTCTTGGCAAAGGAGCTATGAAGACTGTGTATAGGGCATTTGATGAGGTTCTGGGGATTGAAGTGGCTTGGAACCAAGTCCATCTAGGTGATGTCTTTCATTCACCAGATCAACTTCAGCGCCTATATTCAGAGGTTCATCTCCTTAAGCACCTTGACCATGAATCTATGATGATCTTCTATGGTTCTTGGATTGATGTCAATTGCAGAACCTTCAACTTCATCACTGAATTGTTCACCTCAGGCACCCTTAGAGAGTACAGGCAAAAGTATAGGAGAGTAGATATGAGGGCAGTGAAAAATTGGGCTTGCCAGATTCTAAGGGGTTTGGAGTATTTACACAGCCATAATCCACCTGTAATACATAGAGACCTCAAGTGTGATAATATCTTTGTTAATGGCCATATGGGGCAGGTCAAGATTGGTGACTTAGGCCTGGCAGCTATACTTCGTAGCTCCCAACATGCTCACAGTGTCATAGGCACACCAGAGTTCATGGCACCAGAACTGTATGAAGAGAAATATAATGAACTGGTAGATGTATACTCATTTGGGATGTGTATGATAGAGATGCTTACTCTTGAGTTCCCATATAGTGAATGCTCCAATCCAGCTCAAATATACAAGAAAGTTACTTCGGGGAAGCTACCAGATGCATTTTACAGAATCCAAGATTTGGAAGCCCAGAGATTTGTGAAAAGATGTTTGTCAAATGTCTCAAAGAGACCATCAGCAGAGGAGCTCTTATTGGACCCATTTTTAGCCATGGAGCAACTTGAATTGTCATTTCCAAGCACACCATTATCTACAAATCAAAGTCTTGTGCTTCATTCAACTGCAGCAATTGCCAATAAGCATCTTTTAATAGGTGATCTGACAAAGAGCACAGATATGACAATCACTGGATCAATAAATGAAGATAATAACACAATTTTCCTTAAAGTGCGGATATCTGATGAAATGGGGCATACAAGACATGTATTCTTCCCATTTGACACTAAAAAAGACACTGCCTTTGAGGTAGCAATGGAGATGGTACAAGAACTTGAAATTAGCCATTTGGAACCATCAGAGATTGCTGCAATGATTGATCATGAGATATCAGCTTTAGTTCCAACTTGGAGGGATAGGTGTAAGTGTAAGCATCAACGACAGCACAGCTTCAACTATGAAGATGATGAGGATAGCAATAATCACCATCCTTTCTTTTTCTCATCTTCTCCATCTTCCCCTCACGGTTCTCTGATTCCCAAGTCTGGTTCCTCCAGCTCCAAGAACCACTTCCATGGGAACCATTGCATAATTACTCAAGAATGGCCTCAAGATGATCACCTATTAATGAACGACGATGCAAGTTCTCTCAGCTCCATGAACTCCATCAAGTGTTCCAATATCCAATACTGTGACTCTAGCAACGAAGATGAGCAAGGCACAATAGTAGTAGATGGAGCTGAAAACAACAAAAAGTGCACAAAACCATGTCATAAGGAAGAAGGAGAAGTTAGTAATTTCACCAAACAGTTGTGCTACATGACAATGAACTCTTGCAGTTGCAGATATGGTGGATCAAGCCATGGATGGCCAAGGCTAACGAAGGTTCGTTCGTGCTTGGATGAGCGTAGAAGCCAACAACTTCTGCGCTCACAACTATTAGAGATGTATAAGTACAAGAGACGTATGTTTAACACAGTTGGGGCCACTGAGGGAATTGGGTTTCAACATCCAGATAAAGGTGGATGCTTTCCTCCTCGGAAATTCATATAG 1848 0.4177 MGDSALIVELRLHLDMLKLILLVDMGVDVLGKGAMKTVYRAFDEVLGIEVAWNQVHLGDVFHSPDQLQRLYSEVHLLKHLDHESMMIFYGSWIDVNCRTFNFITELFTSGTLREYRQKYRRVDMRAVKNWACQILRGLEYLHSHNPPVIHRDLKCDNIFVNGHMGQVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDVYSFGMCMIEMLTLEFPYSECSNPAQIYKKVTSGKLPDAFYRIQDLEAQRFVKRCLSNVSKRPSAEELLLDPFLAMEQLELSFPSTPLSTNQSLVLHSTAAIANKHLLIGDLTKSTDMTITGSINEDNNTIFLKVRISDEMGHTRHVFFPFDTKKDTAFEVAMEMVQELEISHLEPSEIAAMIDHEISALVPTWRDRCKCKHQRQHSFNYEDDEDSNNHHPFFFSSSPSSPHGSLIPKSGSSSSKNHFHGNHCIITQEWPQDDHLLMNDDASSLSSMNSIKCSNIQYCDSSNEDEQGTIVVDGAENNKKCTKPCHKEEGEVSNFTKQLCYMTMNSCSCRYGGSSHGWPRLTKVRSCLDERRSQQLLRSQLLEMYKYKRRMFNTVGATEGIGFQHPDKGGCFPPRKFI 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1085g00002 615 FunFam Probable serine/threonine-protein kinase WNK1 26 105 - -
Sebi1085g00002 615 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 29 523 - -
Sebi1085g00002 615 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Sebi1085g00002 615 Pfam Protein kinase domain 29 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1085g00002 615 Gene3D Phosphorylase Kinase; domain 1 26 105 - -
Sebi1085g00002 615 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1085g00002 615 FunFam probable serine/threonine-protein kinase WNK9 107 287 - -
Sebi1085g00002 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Sebi1085g00002 615 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1085g00002 615 CDD STKc_WNK 28 282 - -
Sebi1085g00002 615 SUPERFAMILY Protein kinase-like (PK-like) 28 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1085g00002 Sebi-Chr1085 6515 11086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1085g00002 28 426 MAP Kinase Kinase Kinase AT3G51630 66.418 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi1085g00002 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1085g00002 K08867 - gmx:100272206 838.18