Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1077g00001 ATGGCCTCTCCTTTGCTGTTGATTTGTTGCTTTGTATTAGTATTGGGTTCCTCCTCCCACTTTCAAGTATCAGAGGCACAAGCTCTTCCTCCAGTAGTGAAGGGACTGTCCTTTTCATTTTTTTCCAAGACATGTCCTCAGCTTGAAAACATGGTCAGAAATCATCTCAAGAAGGTGTTCAAGCAGGACAATGGCCAAGCTCCCGGGGAAAGGGATCAAATAGCAAACGGAGGGATGAGGGCAGAGGCATTGAAGACCATAGATGACCTGAGAGGTCTTGTTCACAAGGCCTGTGGTAAGATTGTCTCCTGTGCTGACATCACTGTTTTGGCAGCTCGTGATGCTGTTTTCCTTTCTGGTGGACCTGATTTTGCAGTGCCACTAGGAAGAAAGGATGGTGTAACCTTTAACATAGCAGGAACAAACAAGCTTCCATCTCCTTTTAGCAACACAACTCAAACCATCAAAACTTTTGCTGAAAAAAACTTTGATGTCACAGATGTGGTAGCATTCTCAGGTGCACACACTTTTGGCCGTGCACATTGTGGCTCATTCTTCAATAGGCTTTCCCCTGTTGACCCTACCATGGACAAAACATTGGCACAAAATCTCAAGGCCACTTGCCCTGACAGAAACTCACAGAACACTGCCAATTTGGACATCAGAACCCCAACAGTGTTTGATAATAAGTATTATATTGATCTAATGAACCGTCAAGGTGTGTTCACTTCAGATCAGGACTTGCTCAATGATCAGAGGACTAAAGGATTGGTTAATTCCTTTGCCAATGACCAGAACCTGTTTTTCCAGAAGTTTGTGAGTGCTGTGATAAAGTTGAGCCAATTGGATGTGTTGACAGGGAATCAAGGTGAAATTCGTGCAAAGTGCAATGTGATTAACAAGAAGAAATCTGTGTTGACATCAATGGTGGAAGAGGTGGTAGAATTCACTGATCAGTTCTAA 963 0.4341 MASPLLLICCFVLVLGSSSHFQVSEAQALPPVVKGLSFSFFSKTCPQLENMVRNHLKKVFKQDNGQAPGERDQIANGGMRAEALKTIDDLRGLVHKACGKIVSCADITVLAARDAVFLSGGPDFAVPLGRKDGVTFNIAGTNKLPSPFSNTTQTIKTFAEKNFDVTDVVAFSGAHTFGRAHCGSFFNRLSPVDPTMDKTLAQNLKATCPDRNSQNTANLDIRTPTVFDNKYYIDLMNRQGVFTSDQDLLNDQRTKGLVNSFANDQNLFFQKFVSAVIKLSQLDVLTGNQGEIRAKCNVINKKKSVLTSMVEEVVEFTDQF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1077g00001 320 SUPERFAMILY Heme-dependent peroxidases 30 300 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 Pfam Peroxidase 69 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 ProSiteProfiles Plant heme peroxidase family profile. 35 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 Gene3D - 65 297 - -
Sebi1077g00001 320 CDD secretory_peroxidase 35 299 IPR033905 GO:0004601|GO:0042744
Sebi1077g00001 320 FunFam Peroxidase 145 279 - -
Sebi1077g00001 320 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 PRINTS Plant peroxidase signature 274 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 PRINTS Plant peroxidase signature 234 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 PRINTS Plant peroxidase signature 218 233 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 PRINTS Haem peroxidase superfamily signature 102 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 PRINTS Haem peroxidase superfamily signature 167 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 PRINTS Haem peroxidase superfamily signature 220 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 PRINTS Haem peroxidase superfamily signature 120 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 PANTHER - 69 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1077g00001 320 Gene3D Peroxidase, domain 2 146 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1077g00001 Sebi-Chr1077 9627 12994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1077g00001 5 314 Peroxidase AT1G71695 48.980 5.92e-110 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1077g00001 K00430 - gmx:547550 472.626