Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1073g00004 ATGATCGTAGGTGGTTCTTCCCCACTAACTTCGAAGAGGAGAAGGGTCACCAACATTTATTCCACGGAGATGGATATTGAAGCTGCTAAGGCCAAGCTTGCAGCTATAAAAGAAAAATTTGGACGAGAGATCCATGTTTTTGAAACATCAGCTCTTTCTCCATCTTCAAATGCTGCATCATCCAATGGAGAGGAGACTGATGACTTCTATGAGTTTACTGCAGAAGATTATTACCGACTTATGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCGTCTCGTAGGTCAAGAATAACCAAAGCAGTAATTAGAGTTCGCTTCCCTGATAATCACACATTGGAGGCTACCTTCCACCCATCAGAAACAGTCCAGAGTTTAATTGATCTCCTCACTAAAGTGATTGCACAGCCAGAGCAGCCATTTCATATATATACTACTCCACCTAAGAAGCTGATCACTAACATGTCTCAAGATTTTTATACTGCTGGCTTTTGTCCCGGTGCCATTGTGTACTTTTCATATAATGTTCCAAAAGGTGATAACACTGTTGTTGACCATATTGGTCCTTACCTACACGAAGAGGTCTTATCTTTGAAGGGTTTGGAATCGGATGGTGCTAATGATGAAGGCCAGCAATCTGAACCTGTACAGTGTGCACCAGAGCCTGTTGAGGCAACACAACCCCTTTCAGTCCAAGAACGTAAGCCTTCTGAGAAGAAGCTTGTTAAACCAAAATGGCTAAAAATGTGA 777 0.4183 MIVGGSSPLTSKRRRVTNIYSTEMDIEAAKAKLAAIKEKFGREIHVFETSALSPSSNAASSNGEETDDFYEFTAEDYYRLMATKKEDKFLKTRKIREAEEASRRSRITKAVIRVRFPDNHTLEATFHPSETVQSLIDLLTKVIAQPEQPFHIYTTPPKKLITNMSQDFYTAGFCPGAIVYFSYNVPKGDNTVVDHIGPYLHEEVLSLKGLESDGANDEGQQSEPVQCAPEPVEATQPLSVQERKPSEKKLVKPKWLKM 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1073g00004 258 SUPERFAMILY Ubiquitin-like 83 181 IPR029071 -
Sebi1073g00004 258 MobiDBLite consensus disorder prediction 242 258 - -
Sebi1073g00004 258 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 258 IPR044232 GO:0032984|GO:0051117
Sebi1073g00004 258 MobiDBLite consensus disorder prediction 212 258 - -
Sebi1073g00004 258 Pfam UBX domain 108 175 IPR001012 GO:0005515
Sebi1073g00004 258 CDD UBX2_UBXN9 110 183 - -
Sebi1073g00004 258 ProSiteProfiles UBX domain profile. 105 181 IPR001012 GO:0005515
Sebi1073g00004 258 Gene3D - 41 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1073g00004 Sebi-Chr1073 64252 69621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1073g00004 38 138 C2H2 Transcription Factor Family AT2G01650 32.381 6.59e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1073g00004 K15627 - gmx:100818386 400.979