Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1072g00007 ATGCAGCAACGCACCTTCATACAGATGAGGACTGTTCTGAAGGTTGTTGATAATTCAGGGGCTAAGAAGGTGATGTGTATACAAGCTTTGAAAGGGAAGAAAGGGGCAAGGTTAGGTGACACAATAGTAGCATCAGTGAAAGAGGCCCATCCTAATGGGAAAATAAAGAAAGGGAAGGTTGTGTATGGGGTGGTTGTGCGTGCAGCTATGCAAAGGGGAAGATGTGATGGAAGTGAGGTCAAGTTTGATGACAATGCTGTGGTGCTTGTTGACAAGCAAGGCCAACCTATTGGGACCAGAGTTTTTGGGCCAGTGCCACATGAGCTCAGGCAGAAGAAGCATGTCAAGATTCTTACTTTGGCAGGGCATATTGCTTAA 378 0.4603 MQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKIKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1072g00007 125 Gene3D Ribosomal protein L14 6 125 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sebi1072g00007 125 SMART Ribosomal_L14_2 6 125 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi1072g00007 125 FunFam 50S ribosomal protein HLP, mitochondrial-like 6 125 - -
Sebi1072g00007 125 Hamap 50S ribosomal protein L14 [rplN]. 6 125 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi1072g00007 125 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 7 124 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi1072g00007 125 NCBIfam 50S ribosomal protein L14 7 124 IPR005745 GO:0003735|GO:0006412|GO:0015934
Sebi1072g00007 125 SUPERFAMILY Ribosomal protein L14 7 124 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sebi1072g00007 125 ProSitePatterns Ribosomal protein L14 signature. 63 89 IPR019972 -
Sebi1072g00007 125 Pfam Ribosomal protein L14p/L23e 7 124 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1072g00007 Sebi-Chr1072 76249 76721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1072g00007 7 108 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 33.945 3.37e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1072g00007 K02874 - gmx:100818301 229.18