Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1072g00001 GCCATTGAAGGGTCAAACCATATCTGCTATTTAACCCCTTGGGATATTACTATGCTGTCTTTGAACTACATCCAGAAGGGCCTCCTATTCAAAAAGCCCTCATCAATTGATAATCTGTTGGAGAAGCTCAAGCACTCCCTTTCTGTTGCCCTCTTCCATTTCTATCCCTTGGCTGGCCGCCTTGTCACTCAAAAAACCCAACACCCTCCCTCTTATTCTATCTTCGTTGATTGCAAAAACAGTTCTGGTGCTAAATTTATCTATGCAACTCTAGACATCACAATATCCGACATCCTCTCCCCTGTTGACTTTCCACCGCTCCTTCAGTCACTGTTTGATCTCAACAGAGCAATCAACCACGATGGTCACACCTTGCCCTTGTTATCCATCCAAGTCACCCAACTCCTGGACGGTGTTTTTATTGGTTGTTCCATAAACCACTGTATCGCTGATGGGACTTCTTATTGGAACTTCTTTAATACATGGTCTCACATCTTTCAAGATGTTCCTGTTTTACACCCACCCCTTCACAATCGTTGGTTTCCAGAGGGATGTGGTCCACTAATCAATCTTCCCTTCAAACATCACGATGAGTTTATCGACAGATATGAACCACCCAAATTGAGGGAGAGGATCTTCCACTTTTCAGCAGAGTCTATTGCGAAACTAAAAGCAAAGGCTAACTTACAATCAAATACAAATAGTAGCACCAAAATCTCTTCGTTTCAATCCTTATCAGCTCATGTTTGGAGATCCATAACTCGCGTGCGCGGCCTAACACATGATCAGAAAACAAGTTTTGTGTTATATGTAAACAATCGACCGAGAATGGAACCGCCTCTGCCAAACGAGTACTTTGGGGCATCAATTAATGTGGTGACTGCAGAGGCGAAGGCAGGGGAGTTGGTTGAGAATGATCTGGGATGGACAGCATGGAAGGTTCACCTTGCTGTTGCAAACTTTAACGACAGTGTGGTGCATCAATTGCTTAAAGATTGGTTACAATCTCCTCTTGTCTTCCAACCTAGTCTCCACTTTGATCCATGCACTGTGGTGATGTCAAGCTCACCAAGGTTTAACATGTATGGGAATGAATTTGGAATGGGGAAAGCTGTGGCTGTTAGAAGTGGGTATGCTAACAAATTTGATGGTTGGCTGACAGCATATGAAGCATATGAAGGAGGGGGAAGCATAGATTTGGCTGTGTGCCTTTTGCCTCATGCAATGACAGCCTTGGAATCAGACCACGAGTTTATGGAGGCAGTTTCTCACTCCAATCCCCTCTACTAG 1290 0.4411 AIEGSNHICYLTPWDITMLSLNYIQKGLLFKKPSSIDNLLEKLKHSLSVALFHFYPLAGRLVTQKTQHPPSYSIFVDCKNSSGAKFIYATLDITISDILSPVDFPPLLQSLFDLNRAINHDGHTLPLLSIQVTQLLDGVFIGCSINHCIADGTSYWNFFNTWSHIFQDVPVLHPPLHNRWFPEGCGPLINLPFKHHDEFIDRYEPPKLRERIFHFSAESIAKLKAKANLQSNTNSSTKISSFQSLSAHVWRSITRVRGLTHDQKTSFVLYVNNRPRMEPPLPNEYFGASINVVTAEAKAGELVENDLGWTAWKVHLAVANFNDSVVHQLLKDWLQSPLVFQPSLHFDPCTVVMSSSPRFNMYGNEFGMGKAVAVRSGYANKFDGWLTAYEAYEGGGSIDLAVCLLPHAMTALESDHEFMEAVSHSNPLY 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1072g00001 429 Pfam Transferase family 11 419 - -
Sebi1072g00001 429 Gene3D - 3 187 IPR023213 -
Sebi1072g00001 429 Gene3D - 196 414 IPR023213 -
Sebi1072g00001 429 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1072g00001 Sebi-Chr1072 3725 5014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1072g00001 30 413 Monolignol Biosynthesis Gene Families AT5G48930 29.657 1.10e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1072g00001 - - gmx:100788297 636.721