Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi106g00090 ATGGAATTTGAAAGTCTGTATCCACCAAATCGGTTTGATGAAGAGATGTACAGCACAGAATGTACTAGTGAAGAGAACATTGTCCTTGATGTGATGAAGCACTATGATGAATTTGTAGAAGAAATGACTCAGATAGAAGCTGCAGTAGTTCCGGGATATCCCACCTCTTCTTTCTGCATTGAGATGGTTGACAACCTGCAAGGTCATGATGGATGCAAAAAGAGTCCTGCAACCGCCAAGGGTTCTGATCAGGAGAGGAAGAAAGTGGTTCGTTGGACAAAAGAGGAGCATGAACGCTTTCTGATGGGACTTAAGAACTATGGCAAAGGGCATTGGAAAAATATCGCTCGCTATTCTGTAATCACAAAGACTCCTACCCAAGTGGCAAGTCATGCTCAAAAGTACCTCAAAAGGCAAAAGCTTTCTGGAGGGAAAGATAATAAAAGGAGGTCTAGTATCCATGACATCACTACTGATAATTTTACAGAACCTACAACTAATTCAGGTCAAGACAAGCCTATTTTGTTCAATGAGTCTCTCATGCCAATTGTGCAACCAGAAGGGATTAATCACCTCAATGAGGAGCCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGACAAATGTGCAACCAGAAGGGATTAATCACCACAATGTGGAGCCAATCATGGAGGTTTTCAATCAAAATTATGATGAAATGTTCATGTTTCCCTCATCTGATATCTATTCCGAGACCCTCAAGTTTCAAGGTCAGCAGGATCTAGACAAATGTCTTTTTCATCATGCTTATGCCCAACAAAATGCTCAAGGTTTCGGAACCACTTCTAATGACTTCAATAAGGACACTCTTTTTGGTTTTGGTGACCATTGTTATACTAATTCTCCTGCATGGTTACAGTAG 909 0.407 MEFESLYPPNRFDEEMYSTECTSEENIVLDVMKHYDEFVEEMTQIEAAVVPGYPTSSFCIEMVDNLQGHDGCKKSPATAKGSDQERKKVVRWTKEEHERFLMGLKNYGKGHWKNIARYSVITKTPTQVASHAQKYLKRQKLSGGKDNKRRSSIHDITTDNFTEPTTNSGQDKPILFNESLMPIVQPEGINHLNEEPLMEVFNPNYESLMTNVQPEGINHHNVEPIMEVFNQNYDEMFMFPSSDIYSETLKFQGQQDLDKCLFHHAYAQQNAQGFGTTSNDFNKDTLFGFGDHCYTNSPAWLQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi106g00090 302 SUPERFAMILY Homeodomain-like 86 140 IPR009057 -
Sebi106g00090 302 CDD SANT 91 136 IPR001005 -
Sebi106g00090 302 MobiDBLite consensus disorder prediction 139 156 - -
Sebi106g00090 302 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
Sebi106g00090 302 MobiDBLite consensus disorder prediction 157 171 - -
Sebi106g00090 302 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 138 IPR006447 GO:0003677
Sebi106g00090 302 SMART sant 88 138 IPR001005 -
Sebi106g00090 302 Gene3D - 90 141 - -
Sebi106g00090 302 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 26 240 IPR043363 -
Sebi106g00090 302 MobiDBLite consensus disorder prediction 139 171 - -
Sebi106g00090 302 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Sebi106g00090 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi106g00090 Sebi-Chr106 1749190 1750376 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi106g00090 Myb_DNA-binding 1.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi106g00090 - - gmx:100783469 246.899