Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi106g00023 ATGGAGAATGAGTGTGTTAATATGAGTGATGATAATGTATTTGGAAAGATAGATGGTGAAGAGGTTATTGGTGGAAAGGGTGAGGGTGAAGAAGGTGTTAGTGGAAAGGTACATGGTGAAGAAGATGTTGGTGGAAAGGTAGATGGGGAAGATGTTGATGGAAAGGAAGAAGCATATGATTTCTATTCCAACTATGCTTGGTGCCATGGTTTTGCTGTAAGAAAAGATGATGTAGGTTATATTGGCAGAGGGTTTGGTAAAGTTAAAGTGATGCGTCAATTTGTTTGTAATAGAGAGGGGTTGAGGAATAAAAAACATTTGGAGAGGGTGGATCGAAAAAGAGAGTCTAAGGCTTTAACGCGAAGTAATTGTCTTGCTAAGCTTCGTGTTCATTTAGACTTGTGGTTTGGGAAGTGGGTAGTGATTAGCTTTGAGGAAAGTCATAATCATGTCTTAACCCCTCCTCAATTTGTTCATCTTATGTCTTCGTATAGAGGTCTTACTAATGCTGATAAGGCACGAGTAAACAACTTCTATTCGGTTGGAGTTAGAACTTGTCATATAATGGGTTTTATGATGGGTCAAAAAGGTGGATATGAAGATCTTGGTTTTTGCAAAAAGGACTTATATAATTACATTGATAATCAGAAGAGGGATAAAATTAAAGATGGTGATGCATATGCTGCTCTTTGTTATCTCCAAGCAAAGGCTGATAATGATCTGTTGCAATTCACCAAGTTCACAATTACAAGTGATGACTTTAAGTCTTTGCTATATGGAAATATTGCCCCTGAGCAGTTTGAAGGTGAGTGGAAGGCTATAATTGAAAAGTATGGTCTTTCTAACAACAGGACTACTTCCATTTGTGAAGGTATTAACTCCTTTATAAAGAGGTTAATGGAAGCTTCTTGTTGTAATCAAGAGGATTATGTTGAGATCATGATAGACCTTCAAAAGCTAACTGAGAAAGTGGAGAATCGTAAAAATTCAGAGCGTAGTCAGCCTAAAACAAGAAATGTGGTTGGTGATCCAACAATGGTTAAGACCAAAGGTGCCCCTAAGAAGAAGTTTACAAAGAAGATAAGGTGTTCACACTATTGTAAGGTTGGGCACACAATTCGCACATGCCCTACACTGCTTGCACGTGATGGCTTATGTGAAGTTGATGAAGTTTCTATTTATGGATCTGAAGAGGAAGAAGACACTATAAATGGTATGTCAATGGGCAATCAACATGATGTAAAGAGGTCACAACCAATTCCTAACCCCAAAGTAAAGGTTAAGGAAAATGACAATGAGGATAGAAAAATAAACAAGAAAGCCAATTGTCATGGAAGAATAAGTGGTGAACTGAAGCCAACCTATCCAACATACTATGAGGTACCATCTGTGAATAGAGCACAAGTAGATGTGACAATGGGCAATGGTTACATGCCACTACAGAACACAATGGAAAATAATGGTCTGTTTCATGGGATACAAAGGTTTCCAATGTTTCCCCAATTTCCACCTGTTCAAATGTATCCATCCTATCCTCATCCCCCAAATCACCATCAAGGTGATCATCTTGGCTATTACCCACAGAATTTTATGGGTGTGCTTTATGAGATGCATAAACAAGCCAATGTAGGAAAGAAGGATGGTGATATTGGTGGAGCTTGA 1662 0.3833 MENECVNMSDDNVFGKIDGEEVIGGKGEGEEGVSGKVHGEEDVGGKVDGEDVDGKEEAYDFYSNYAWCHGFAVRKDDVGYIGRGFGKVKVMRQFVCNREGLRNKKHLERVDRKRESKALTRSNCLAKLRVHLDLWFGKWVVISFEESHNHVLTPPQFVHLMSSYRGLTNADKARVNNFYSVGVRTCHIMGFMMGQKGGYEDLGFCKKDLYNYIDNQKRDKIKDGDAYAALCYLQAKADNDLLQFTKFTITSDDFKSLLYGNIAPEQFEGEWKAIIEKYGLSNNRTTSICEGINSFIKRLMEASCCNQEDYVEIMIDLQKLTEKVENRKNSERSQPKTRNVVGDPTMVKTKGAPKKKFTKKIRCSHYCKVGHTIRTCPTLLARDGLCEVDEVSIYGSEEEEDTINGMSMGNQHDVKRSQPIPNPKVKVKENDNEDRKINKKANCHGRISGELKPTYPTYYEVPSVNRAQVDVTMGNGYMPLQNTMENNGLFHGIQRFPMFPQFPPVQMYPSYPHPPNHHQGDHLGYYPQNFMGVLYEMHKQANVGKKDGDIGGA 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi106g00023 553 PANTHER OS01G0519700 PROTEIN 53 242 - -
Sebi106g00023 553 MobiDBLite consensus disorder prediction 26 49 - -
Sebi106g00023 553 MobiDBLite consensus disorder prediction 399 433 - -
Sebi106g00023 553 MobiDBLite consensus disorder prediction 325 351 - -
Sebi106g00023 553 Pfam FAR1 DNA-binding domain 60 153 IPR004330 -
Sebi106g00023 553 MobiDBLite consensus disorder prediction 403 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi106g00023 Sebi-Chr106 492228 495616 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi106g00023 FAR1 9.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi106g00023 - - ccaj:109792835 243.047