Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1067g00023 ATGAGTGCATCAGAAAACCCTATTCATAAGGGGAAAGCAAATTCGTCCTCTTCTTCAACAAAGTTGATGTTATTTGGTTTCCCCTTGACTCCCACTCCAACTGGCCAAGAACACATGGATGCAGCACCAGTGAATAACAAGACTGGTATTTTCAGATGTCTCTTCTGTTGTCGTGAATTTTCCAATTCACAAGCTTTGGGAGGGCATCAAAATGCGCACAGGAGAGAAAGGCAGAGAGCACACTTTCTTGTTCCCATACTTCCCCATCATCAACGCTTCATAAAAACTGGCTATCCTATCATAGCAGCACATCATGAGAAACCTTGTGGGTTCCAGCCACAACTACCTATGGCGTATGATGAGGTTGAGGGACCTCTTTTTATGAGATCAGCAGCTGCAGGCACGTCCAGAAAAAATGTGCCTTTCAAACAAGTACAGAACCTTGATGGTGATGGTGATGTTGATCTTAACTTGACTCTTGCTAGTAGTAGTATTATACCACCCTCCAATTCCACCAGGGACGACGTCAATTAA 534 0.4382 MSASENPIHKGKANSSSSSTKLMLFGFPLTPTPTGQEHMDAAPVNNKTGIFRCLFCCREFSNSQALGGHQNAHRRERQRAHFLVPILPHHQRFIKTGYPIIAAHHEKPCGFQPQLPMAYDEVEGPLFMRSAAAGTSRKNVPFKQVQNLDGDGDVDLNLTLASSSIIPPSNSTRDDVN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1067g00023 177 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Sebi1067g00023 177 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Sebi1067g00023 177 PANTHER ZINC FINGER PROTEIN 5 13 83 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1067g00023 Sebi-Chr1067 161948 162481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1067g00023 16 103 C2H2 Transcription Factor Family AT1G67030 39.583 1.15e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1067g00023 - - vvo:131599717 121.709