Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1060g00003 ATGGGAGGTTACTCTGCTAATCCCGCCGACTACAAGCTTCTAGAAGAAGTTGGTTATGGCGCCACCGCCACCGTTTACAGGGCGATCTATCTTCCTTTCAACCAACTTGTCGCTATCAAGTGTTTGGATCTCGATCGCTGCAATACCAATAATCTGGATGATATACGTAGGGAGACGCAAACGATGAGTTTGATTGATCATCCCAACGTTGTGAGGGCTTACTGTTCCTTTGCGGTGGAACGGAGTCTTTGGGTGGTTATGCCATTCATGGATGAGGGTTCTTGCTTGCACCTCATGAAGATAGCTTACACTGACGGATTTGAAGAGGACGCAATTGGATCGATCCTCAAAGAAAGTCTCAAGGCCTTGGATTATCTTCATCGACAGGGTCATATTCATCGAGATGTCAAGGCTGGTAACATTTTACTTGATAGCAATGGGACTGTGAAGCTTGCTGACTTTGGTGTTTCGGCTTGCATGTTTGACACTGGCGAGAGACAGCGTTCCAGGAATACTTTTGTAGGGACTCCTTGCTGGATGGCTCCAGAGGTACTACAACCGGGAAGTGGTTATAATTCCAAGGCTGATATTTGGTCATTTGGAATTACGGCACTGGAACTGGCTCATGGTCATGCACCATTTTCAAAATATCCCCCAATGAAGGTTCTTCTGATGACCATACAGAATGCCCCTCCTGGACTTGATTATGATCGTGATAAAAAGTTTTCTAAGTCATTTAAGGAAATGGTTGCCATGTGCTTGGTGAAAGATCAAACAAAGAGACCATCAGCAGAGAAGTTACTAAAACTTCCCTTCTTCAAAAATGCTAAACCTCCTGAGCTCTCTGTAAAGAAATTGTTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAAGCCCTCCAGCTTAAAGATGCAGCACAACTAGCACTGAAGAAAATGCCTTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATACCAGCGAGGAGTTAGCGCATGGAACTTTGACATTGATGATTTGAAAGCTCAAGCTTCGTTGGGCACAACTGATTCCCAGTCTGGTGCTGGCGAAACGAATTCAGAGAAATTACCACAGGATAAGATCACATCACAAATAGGTGGTATTGACATACAACAGACTGAACAGAGCGAATACTTGAACAAAAAGGAGAAGGTTCTTGAAAGTGATCTCCAGGAACCTGTATTACCCAAAAATATTATTTGGAAGAGAAATGGATCATTTACAGAGGCAACAACATCCACGGTAGACAAAGATATAGGTACAAGCAAGGTTAAAGCTCATTCTGTGAAAAATCGTCAAACCCAAAGTGGGCCTTTGGTGCCTGGCACAGTTCTCAGTTATTCTTCCTCAGAAAGAGGCCGTACATTTGAAAGGCTATGA 1401 0.4361 MGGYSANPADYKLLEEVGYGATATVYRAIYLPFNQLVAIKCLDLDRCNTNNLDDIRRETQTMSLIDHPNVVRAYCSFAVERSLWVVMPFMDEGSCLHLMKIAYTDGFEEDAIGSILKESLKALDYLHRQGHIHRDVKAGNILLDSNGTVKLADFGVSACMFDTGERQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKLPFFKNAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDIDDLKAQASLGTTDSQSGAGETNSEKLPQDKITSQIGGIDIQQTEQSEYLNKKEKVLESDLQEPVLPKNIIWKRNGSFTEATTSTVDKDIGTSKVKAHSVKNRQTQSGPLVPGTVLSYSSSERGRTFERL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1060g00003 466 Gene3D Transferase(Phosphotransferase) domain 1 93 324 - -
Sebi1060g00003 466 SMART serkin_6 11 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1060g00003 466 FunFam Serine/threonine-protein kinase BLUS1 1 89 - -
Sebi1060g00003 466 MobiDBLite consensus disorder prediction 347 374 - -
Sebi1060g00003 466 MobiDBLite consensus disorder prediction 432 466 - -
Sebi1060g00003 466 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 93 323 - -
Sebi1060g00003 466 CDD STKc_OSR1_SPAK 10 273 - -
Sebi1060g00003 466 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Sebi1060g00003 466 ProSiteProfiles Protein kinase domain profile. 11 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1060g00003 466 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 453 IPR047173 GO:0043539
Sebi1060g00003 466 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Sebi1060g00003 466 MobiDBLite consensus disorder prediction 433 459 - -
Sebi1060g00003 466 SUPERFAMILY Protein kinase-like (PK-like) 10 332 IPR011009 -
Sebi1060g00003 466 Pfam Protein kinase domain 11 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1060g00003 Sebi-Chr1060 130190 133506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1060g00003 3 465 MAP Kinase Kinase Kinase Kinase AT4G24100 69.032 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Sebi1060g00003 Pkinase 2.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1060g00003 - - gmx:100809903 768.459