Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi105g00037 ATGTCATTGATGCTCTTACGTATGCTGTTTTTCGTTTCATCTTTCCATCATGAAATGAAGCAGATTCACTTTTGTTATAGATATCTTAGAATCAAGTTTCATTCATCCACCAGTGCACTGCTTCTGACCTGGCTTATTGACAGTGGAGGATTTGCAAAGAAAGTGAAAAACACTACTCTGTCTTCAGCTGATCAGATCAAGGATTGTGGGGCATACCGTGAATGCCCAAACTGCCATCATCATATTGATAACAGTGATGTTTCTACTGAATGGCCTGGCTTTCCTCTTGGTGTAAAGTTTGATCCTTCTGATGTAGAACTCTTAGAACATTTAGCAGCAAAATGTGGCCTTGGGAACACAGAGCCACACATGTTTATCAATGAGTTCATCCCAACACTTGAAGAAGACCAAGGTATTTGCTACACACATCCAGAAAATCTTCCAGGTGCTAAGAAAGATGGGAGTAGTGTACATTTCTTTCATAGAACAATCAATGCATATAGTACTGGTCAGCGAAAGCGTCGAAAGATTCAGCATAATGATTTGACTGAAGAGCATGTACGCTGGCATAAGACTGGTAAGACCAAAGCTGTGATAGAAGATGGAGTACATAAGGGCTTTAAGAAGATCATGGTTCTTTATATAAGGTGTAAGAAAGGGTCCAAGCCTGATAAATCCAACTGGATAATGCATCAGTACCATCTAGGGACTGAAGAAGATGAGAAGGATGGTGAATATGTGGTCTCAAAAATTTTTTATCAACAAAAGGGGACGGAGAAAAATGAGAGTACAATGGTTGAAGATTCTGACAACATAATATCGCGAACAAGTCCAAGGACTCCAAAACCAAATCCCCCCAATCCACCTCGCACAGGAAAATTCATTGACTGTGATGATAATATTGATGAAACTGCACTTCTGTCATTTGCCCAGGATGCCAAGTCTATCCCTGGAAAATCACATACCCCACTAACTGATGGTCAGGATCAGGACAATACCGGCAACCCTGCATGGTTGGCTGGTGAATCACAGGCTGTGGAGAATTCTGAATATGATGGCTTGGATGACATATTATTGTGCAAGGAGATTTTAGATTCTTCTGCTCCATTAAATGATTCTGGATTGGACCCCTCCACTCTCAATGGCTTTGCTTGCCATGAAAATGAAATGGCTAGAAATGATAATGTAACTTACGGAACTTCTGTGCTGGATACACTGGAATTGGATACTCCTCCAGATTTTGATCTTTCTTTCAATGAAAACGATGCTATCAGAAATTTAATCTTCACCGTAGAGGAGAACGCAGAATCGTCCTCTTCCACTACAAAATTGGAATGGAAATCGTCACCTGATCTGTTCCATTTTGGAAGTTTTGGATTCCAATCTGCATCTGGTTTTTCAAAGCTCTCTGGATGCGATGACAACACTGTTTGCGTCAACAGTGAGAATGACAAGGACGGGGAGGATGAGCAAGGTGGAGGAAATCTGGTGCCTTCTAATCGGATCGTTGGCGTGATTGAAGAAGGAGGTGTCAATGGCTCCGCATTTTCTCTGGAACAAAAATCGTGCATCGAATACAACAAGCTTCTCGCTAAGTCCAAGAGGAACCTCAAAATCTGCGTCGAAAGGCTCTCCAATTGCAAAGCCGCAGGGGGCAATGATTGCGTGAAACTTGAGGAGCTACTGATGGAGGAATCGTGGTTAGAAGCTCTCCCTGGAGAACTTCAGAAACCCTATGCCGTTACTCTTTCCAAATTCGTTGAAACAGAGAGATTTCCAATTCGAACCAAGGTGAAACGTGTCTCTGTCCAAGCTGCCAAGGTCACTCTCCTTCATGCGCAGAAGGTGTTTGTTTTTATGACTAAGAGGATTGTAGTTCTTTTGTTGTTCTTTACTCTTGCCAGGGATAAGTTAATTGATGATTCTGGTAAGCCATTTGTTTTGGTTGGCCAAGAGAGCAGTTTGAGGAAAATGAACGGTCCTGTTTTGTTGATTCGAGAAAATACTGCTGAGTTGCCTATTTACTTGGCTAATTCTTTGAATAGTTTGAGGCTTAAAGGGCAGCAAACTGCTGCTATTGAGACTTTGCTGCATTTTGTTTGGCAGACTTTGGAAGGAACCCCTGTTCTTGTTCATGCAAGTCCATTTGCAAATATTGCTCATGGAAATTCTTCTATTGTGGCTGATAAGATTGCACTGCAACCACCAGGTGGATTTGTAGTTACTGAAGCTAGTTTTGGTGCTGATATTGGAGCTGAAAAGCTTATGAACACCAAGTGTAGATATAGTGGTTTGCCACCTCAATGTCCAATTATTGTGGCAACAATAAGGGCACTAAAAATGCATGGTGGAGGGCCGACAATATGCTGCTCTGATGATCTAAATGTTGTGGTTGCTATTAACAAGTTTTCAAGTGACACTGAAGCTGAGCTAAATACGGTTAGAAATGCTGCCCTAGCTGCTGGAGCTTATGATGCTATAATTTGTACCCATCATACCCATGGAGGCTGGTCAGTTGTAAAACCAAAGTTGCAGAACTCAATTGAGCTAACTGTTGCAGCCCATGATACAACTGGTGGATATATAGGCGGTGTTCTTTGTGCAATTATGTGCGTGGACCAGGTGGATTTTCTCAAGGTTGTTGTAGAACGCAGTGGTGAATTGTTTTTGTTTCAAGTTGATATTGGTTGA 2691 0.4181 MSLMLLRMLFFVSSFHHEMKQIHFCYRYLRIKFHSSTSALLLTWLIDSGGFAKKVKNTTLSSADQIKDCGAYRECPNCHHHIDNSDVSTEWPGFPLGVKFDPSDVELLEHLAAKCGLGNTEPHMFINEFIPTLEEDQGICYTHPENLPGAKKDGSSVHFFHRTINAYSTGQRKRRKIQHNDLTEEHVRWHKTGKTKAVIEDGVHKGFKKIMVLYIRCKKGSKPDKSNWIMHQYHLGTEEDEKDGEYVVSKIFYQQKGTEKNESTMVEDSDNIISRTSPRTPKPNPPNPPRTGKFIDCDDNIDETALLSFAQDAKSIPGKSHTPLTDGQDQDNTGNPAWLAGESQAVENSEYDGLDDILLCKEILDSSAPLNDSGLDPSTLNGFACHENEMARNDNVTYGTSVLDTLELDTPPDFDLSFNENDAIRNLIFTVEENAESSSSTTKLEWKSSPDLFHFGSFGFQSASGFSKLSGCDDNTVCVNSENDKDGEDEQGGGNLVPSNRIVGVIEEGGVNGSAFSLEQKSCIEYNKLLAKSKRNLKICVERLSNCKAAGGNDCVKLEELLMEESWLEALPGELQKPYAVTLSKFVETERFPIRTKVKRVSVQAAKVTLLHAQKVFVFMTKRIVVLLLFFTLARDKLIDDSGKPFVLVGQESSLRKMNGPVLLIRENTAELPIYLANSLNSLRLKGQQTAAIETLLHFVWQTLEGTPVLVHASPFANIAHGNSSIVADKIALQPPGGFVVTEASFGADIGAEKLMNTKCRYSGLPPQCPIIVATIRALKMHGGGPTICCSDDLNVVVAINKFSSDTEAELNTVRNAALAAGAYDAIICTHHTHGGWSVVKPKLQNSIELTVAAHDTTGGYIGGVLCAIMCVDQVDFLKVVVERSGELFLFQVDIG 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi105g00037 896 Gene3D - 791 842 IPR027417 -
Sebi105g00037 896 Gene3D - 680 790 IPR027417 -
Sebi105g00037 896 MobiDBLite consensus disorder prediction 257 297 - -
Sebi105g00037 896 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 43 347 IPR044799 GO:0003700
Sebi105g00037 896 FunFam NAC domain-containing protein 8 103 258 - -
Sebi105g00037 896 Gene3D NAC domain 103 258 IPR036093 GO:0003677|GO:0006355
Sebi105g00037 896 Pfam Formate--tetrahydrofolate ligase 793 836 IPR000559 GO:0004329|GO:0005524
Sebi105g00037 896 Pfam Formate--tetrahydrofolate ligase 699 785 IPR000559 GO:0004329|GO:0005524
Sebi105g00037 896 MobiDBLite consensus disorder prediction 313 337 - -
Sebi105g00037 896 ProSiteProfiles NAC domain profile. 94 254 IPR003441 GO:0003677|GO:0006355
Sebi105g00037 896 MobiDBLite consensus disorder prediction 321 337 - -
Sebi105g00037 896 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 698 836 IPR027417 -
Sebi105g00037 896 Pfam No apical meristem (NAM) protein 95 235 IPR003441 GO:0003677|GO:0006355
Sebi105g00037 896 ProSitePatterns Formate--tetrahydrofolate ligase signature 2. 773 784 IPR020628 GO:0005524
Sebi105g00037 896 SUPERFAMILY NAC domain 78 254 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi105g00037 Sebi-Chr105 1404111 1409942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi105g00037 75 254 NAC Transcription Factor Family AT1G28470 56.216 1.02e-62 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi105g00037 NAM 3.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi105g00037 - - gmx:100794879 593.193