Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi105g00036 ATGAGGCCAATTTTGATGAAAGGCCACGAGAGGCCATTGACATTCCTAAAGTACAACAGGGACGGTGATCTCCTTTTCTCTTGCGCGAAGGACCACAACCCCACCGTGTGGTTTGCTGACAACGGTGAACGTTTGGGCACTTATAGAGGCCACAACGGAGATTCGGGACGACTCATAACTGGTAGTGCGGATCAGTCTGCCAAGCTATGGAACGTGCAAACTGGTCAGCAATTGTACACCTTCAATTTTGATTCCCCTGCTAGGTCTGTGGACTTCTCCGTCGGTGATAAGCTTGCAGTTATCACTACTGACCCCTTTATGGAGCTGCCTTCTGCTATCCATGTCAAACGCATTGCTAAAGATCCCACTGACCAGACCGGGGAATCTCTGCTTGTCATTAAGGGCCCTCAGGGAAGAATTAATAGAGCTATTTGGGGACCTCTCAACAAAACCATCATTAGTGCCGGAGAAGATGCTATTATTCGTATTTGGGATTCTGAGACTGGAAAACTACTTAAAGAGTCAGACAAGGAATCTGGCCACAAAAAGACAATAACATCACTAGCAAAATCTGTTGATGGTTCACATTTCCTCACTGGCTCCCTTGATAAGTCTGCTAGGCTTTGGGATACCAGAACATTGACTCTTATCAAGACATATGTGACAGAACGCCCTGTCAATGCAGTCACAATGTCACCTCTTCTTGATCACGTGGTAATTGGAGGTGGTCAGGATGCATCAGCTGTTACAACCACTGATCATCGTGCTGGCAAATTTGAAGCCAAATTCTTTGATAAGATTCTTCAAGAAGAAATCGGGGGTGTGAAAGGGCATTTTGGACCGATTAATGCACTGGCCTTTAACCCTGATGGAAAAAGGATTTTGAGAGCTTGA 894 0.4575 MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGDSGRLITGSADQSAKLWNVQTGQQLYTFNFDSPARSVDFSVGDKLAVITTDPFMELPSAIHVKRIAKDPTDQTGESLLVIKGPQGRINRAIWGPLNKTIISAGEDAIIRIWDSETGKLLKESDKESGHKKTITSLAKSVDGSHFLTGSLDKSARLWDTRTLTLIKTYVTERPVNAVTMSPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKRILRA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi105g00036 297 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 133 170 - -
Sebi105g00036 297 SUPERFAMILY WD40 repeat-like 4 295 IPR036322 GO:0005515
Sebi105g00036 297 ProSiteProfiles Trp-Asp (WD) repeats profile. 178 219 IPR001680 GO:0005515
Sebi105g00036 297 ProSiteProfiles Trp-Asp (WD) repeats profile. 6 47 IPR001680 GO:0005515
Sebi105g00036 297 SMART WD40_4 1 38 IPR001680 GO:0005515
Sebi105g00036 297 SMART WD40_4 168 210 IPR001680 GO:0005515
Sebi105g00036 297 SMART WD40_4 41 71 IPR001680 GO:0005515
Sebi105g00036 297 SMART WD40_4 126 165 IPR001680 GO:0005515
Sebi105g00036 297 SMART WD40_4 213 252 IPR001680 GO:0005515
Sebi105g00036 297 Hamap Eukaryotic translation initiation factor 3 subunit I [EIF3I]. 1 297 IPR027525 GO:0003743|GO:0005737|GO:0005852
Sebi105g00036 297 PRINTS G protein beta WD-40 repeat signature 152 166 IPR020472 -
Sebi105g00036 297 PRINTS G protein beta WD-40 repeat signature 197 211 IPR020472 -
Sebi105g00036 297 PRINTS G protein beta WD-40 repeat signature 58 72 IPR020472 -
Sebi105g00036 297 Pfam WD domain, G-beta repeat 179 210 IPR001680 GO:0005515
Sebi105g00036 297 Gene3D - 1 297 IPR015943 GO:0005515
Sebi105g00036 297 ProSiteProfiles Trp-Asp (WD) repeats profile. 54 80 IPR001680 GO:0005515
Sebi105g00036 297 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 178 213 - -
Sebi105g00036 297 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 293 - -
Sebi105g00036 297 CDD WD40 7 294 - -
Sebi105g00036 297 ProSiteProfiles Trp-Asp (WD) repeats profile. 133 174 IPR001680 GO:0005515
Sebi105g00036 297 ProSitePatterns Trp-Asp (WD) repeats signature. 152 166 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi105g00036 Sebi-Chr105 1384474 1386345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi105g00036 1 292 Eukaryotic Initiation Factors Gene Family AT2G46290 76.898 1.42e-174 485