Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi105g00028 ATGGCCAATGGCATTGGTAACTGGAGGCATGATATGTTTAACTATGCACAAGACAACACGAGCAACCAAACTGCGTGTAGATTGTGCAACCAAGGTTTCATAAACACTCAAGCCCTCATAACCCACATTGAATCTCACATAGAACATGAAGAGGCTGCCATAAGAAGGCTCTATAATTCAGCACTAGATATCAACTCCCATAAACAAGTGGTTTCCCATCACTTTCCATCCAGTTCCCAAGTTCCAAAAGAAACCCAAAACATCACTGAGTGCATATTTTCCCAATCATCACCACAACCTTTGACCATGCCTCAGCCAAAAAGAAACCCATTTTTCAGTCCTAGCCAGATTTGTTCTTCACAGCCAGTTAGGCAAATGCAACTTTTACCACAGGTTCTTTCATCTGCAGGGAATGAAGTAGCTGGAATAGCAGAGTTGTCAACTCCACAATTCTACCAAAGGAAGCTAGCAGAAGAATCTCCAAAACATGCTACTAAGGCATATATCATGCAGCTGGAGAAACCCATCAAGAAGACTGATTTGGTTAACATTGATGATGACAAGTCAGAGGTGCAAACATTGGATTTAGCACTTAAGCTCTAG 603 0.4179 MANGIGNWRHDMFNYAQDNTSNQTACRLCNQGFINTQALITHIESHIEHEEAAIRRLYNSALDINSHKQVVSHHFPSSSQVPKETQNITECIFSQSSPQPLTMPQPKRNPFFSPSQICSSQPVRQMQLLPQVLSSAGNEVAGIAELSTPQFYQRKLAEESPKHATKAYIMQLEKPIKKTDLVNIDDDKSEVQTLDLALKL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi105g00028 200 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Sebi105g00028 200 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi105g00028 Sebi-Chr105 934925 935527 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi105g00028 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi105g00028 - K09236 lja:Lj2g3v1643270.1 166.007