Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1059g00007 TTTAAGGCTGATGAGATCACTGGTATCATGAAAGATTTTGACGAACCAGGCTATCTTGCTCCTACTGGCTTGCACCTTGGTGGCACCAAATACATGGTAATCCAGGGAGAGCCAGGAGCTGTCATCCGTGGGAAGAAGGGATCTGGAGGTATCACCATAAAGAAAACCGGCCAAGCTCTAGTTTTTGGCATCTATGAGGAACCTGTTACTCCTGGACAGTGCAACATGGTTGTTGAGAGGTTGGGAGATTACCTTGTTGATCAGGGTCTGTAG 273 0.4762 FKADEITGIMKDFDEPGYLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1059g00007 90 SMART prof_2 2 90 IPR005455 GO:0003779
Sebi1059g00007 90 PRINTS Plant profilin signature 11 25 IPR005455 GO:0003779
Sebi1059g00007 90 PRINTS Plant profilin signature 63 76 IPR005455 GO:0003779
Sebi1059g00007 90 PRINTS Plant profilin signature 76 89 IPR005455 GO:0003779
Sebi1059g00007 90 PRINTS Plant profilin signature 30 39 IPR005455 GO:0003779
Sebi1059g00007 90 PRINTS Plant profilin signature 43 58 IPR005455 GO:0003779
Sebi1059g00007 90 PRINTS Profilin signature 23 37 IPR005455 GO:0003779
Sebi1059g00007 90 PRINTS Profilin signature 59 72 IPR005455 GO:0003779
Sebi1059g00007 90 PRINTS Profilin signature 72 89 IPR005455 GO:0003779
Sebi1059g00007 90 CDD PROF 1 89 IPR005455 GO:0003779
Sebi1059g00007 90 Gene3D Dynein light chain 2a, cytoplasmic 1 90 - -
Sebi1059g00007 90 FunFam Profilin 1 90 - -
Sebi1059g00007 90 Pfam Profilin 2 89 IPR005455 GO:0003779
Sebi1059g00007 90 SUPERFAMILY Profilin (actin-binding protein) 2 89 IPR036140 -
Sebi1059g00007 90 PANTHER PROFILIN 1 89 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1059g00007 Sebi-Chr1059 110032 111703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1059g00007 1 90 Cytoskeleton Gene Families AT4G29340 83.333 5.39e-52 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1059g00007 K05759 - csv:101219322 172.17